SFB 1456 | Cluster A | A03: Dimensionality reduction and regression in Wasserstein space for quantitative 3D histology RSS Feed


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  • 2024 | Preprint
    ​ ​The Riemannian geometry of Sinkhorn divergences​
    Lavenant, H.; Luckhardt, J.; Mordant, G.; Schmitzer, B.  & Tamanini, L.​ (2024)
    ​Details  arXiv 
  • 2024 | Preprint
    ​ ​Transfer Operators from Batches of Unpaired Points via Entropic Transport Kernels​
    Beier, F.; Bi, H.; Sarrazin, C.; Schmitzer, B.  & Steidl, G.​ (2024)
    ​Details  arXiv 
  • 2024 | Journal Article
    ​ ​3D imaging of SARS-CoV-2 infected hamster lungs by X-ray phase contrast tomography enables drug testing​
    Reichmann, J. ; Sarrazin, C.; Schmale, S.; Blaurock, C.; Balkema-Buschmann, A.; Schmitzer, B. & Salditt, T. ​ (2024) 
    Scientific Reports, 14(1).​ DOI: https://doi.org/10.1038/s41598-024-61746-4 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Cytoarchitecture of SARS-CoV-2 infected hamster lungs by X-ray phase contrast tomography: imaging workflow and classification for drug testing​
    Reichmann, J. ; Sarrazin, C.; Schmale, S.; Blaurock, C.; Balkema-Buschmann, A.; Schmitzer, B.  & Salditt, T. ​ (2024). DOI: https://doi.org/10.1101/2024.01.21.576083 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Neodymium acetate as a contrast agent for x-ray phase-contrast tomography​
    Reichmann, J. ; Ruhwedel, T.; Möbius, W.   & Salditt, T. ​ (2023) 
    Journal of Medical Imaging, 10(5) art. 056001​.​ DOI: https://doi.org/10.1117/1.JMI.10.5.056001 
    ​Details  DOI 
  • 2023 | Journal Article | 
    ​ ​Human lung virtual histology by multi-scale x-ray phase-contrast computed tomography​
    Reichmann, J. ; Verleden, S. E; Kühnel, M.; Kamp, J. C; Werlein, C.; Neubert, L. & Müller, J.-H. et al.​ (2023) 
    Physics in Medicine and Biology,.​ DOI: https://doi.org/10.1088/1361-6560/acd48d 
    ​Details  DOI  PMID  PMC 
  • 2023 | Journal Article
    ​ ​3d Virtual Histology Reveals Pathological Alterations of Cerebellar Granule Cells in Multiple Sclerosis​
    Frost, J.; Schmitzer, B. ; Töpperwien, M.; Eckermann, M.; Franz, J.; Stadelmann, C.   & Salditt, T. ​ (2023) 
    Neuroscience,.​ DOI: https://doi.org/10.1016/j.neuroscience.2023.04.002 
    ​Details  DOI  PMID  PMC 
  • 2023 | Preprint
    ​ ​Manifold learning in Wasserstein space​
    Hamm, K.; Moosmüller, C.; Schmitzer, B.  & Thorpe, M.​ (2023). DOI: https://doi.org/10.48550/ARXIV.2311.08549 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Linearized optimal transport on manifolds​
    Sarrazin, C.& Schmitzer, B. ​ (2023). DOI: https://doi.org/10.48550/ARXIV.2303.13901 
    ​Details  DOI 
  • 2022 | Conference Paper
    ​ ​Imaging of excised cochleae by micro-CT: staining, liquid embedding, and image modalities​
    Schaeper, J. J. ; Liberman, M. C. & Salditt, T.​ (2022)
    In:Müller, Bert; Wang, Ge​ (Eds.), ​Proceeding of SPIE. (Vol. 12242). ​SPIE Optical Engineering + Applications, Developments in X-Ray Tomography XIV​, San Diego.
    Proc. SPIE 12242​ DOI: https://doi.org/10.1117/12.2632792 
    ​Details  DOI 

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