Prof. Dr. Edgar Wingender

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  • 2022 | Journal Article | Research Paper | 
    ​ ​High-Throughput Profiling of Colorectal Cancer Liver Metastases Reveals Intra- and Inter-Patient Heterogeneity in the EGFR and WNT Pathways Associated with Clinical Outcome​
    Menck, K.; Wlochowitz, D.; Wachter, A.; Conradi, L.-C.; Wolff, A.; Scheel, A. H. & Korf, U. et al.​ (2022) 
    Cancers, 14(9).​ DOI: https://doi.org/10.3390/cancers14092084 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Text mining-based word representations for biomedical data analysis and protein-protein interaction networks in machine learning tasks​
    Alachram, H.; Chereda, H.; Beißbarth, T. ; Wingender, E.   & Stegmaier, P.​ (2021) 
    PLoS One, 16(10) art. e0258623​.​ DOI: https://doi.org/10.1371/journal.pone.0258623 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​IGFBP2 Is a Potential Master Regulator Driving the Dysregulated Gene Network Responsible for Short Survival in Glioblastoma Multiforme​
    Kalya, M.; Kel, A.; Wlochowitz, D.; Wingender, E.   & Beißbarth, T. ​ (2021) 
    Frontiers in Genetics, 12 art. 670240​.​ DOI: https://doi.org/10.3389/fgene.2021.670240 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Constructing temporal regulatory cascades in the context of development and cell differentiation​
    Daou, R.; Beißbarth, T. ; Wingender, E. ; Gültas, M. & Haubrock, M. ​ (2020) 
    PLoS One, 15(4) pp. e0231326​.​ DOI: https://doi.org/10.1371/journal.pone.0231326 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer​
    Kel, A.; Boyarskikh, U.; Stegmaier, P.; Leskov, L. S.; Sokolov, A. V.; Yevshin, I. & Mandrik, N. et al.​ (2019) 
    BMC Bioinformatics, 20(S4).​ DOI: https://doi.org/10.1186/s12859-019-2687-7 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​mirTrans: a resource of transcriptional regulation on microRNAs for human cell lines​
    Hua, X.; Tang, R.; Xu, X.; Wang, Z.; Xu, Q.; Chen, L. & Wingender, E.  et al.​ (2017) 
    Nucleic Acids Research, 46(D1) pp. D168​-D174​.​ DOI: https://doi.org/10.1093/nar/gkx996 
    ​Details  DOI 
  • 2017 | Journal Article | 
    ​ ​geneXplainR: An R interface for the geneXplain platform​
    Stegmaier, P.; Kel, A. E. & Wingender, E. ​ (2017) 
    The Journal of Open Source Software, 2(18) pp. 412​.​ DOI: https://doi.org/10.21105/joss.00412 
    ​Details  DOI 
  • 2016 | Journal Article
    ​ ​Multi-omics "upstream analysis" of regulatory genomic regions helps identifying targets against methotrexate resistance of colon cancer​
    Kel, A. E.; Stegmaier, P.; Valeev, T.; Koschmann, J.; Poroikov, V.; Kel-Margoulis, O. V. & Wingender, E. ​ (2016) 
    EuPA open proteomics, 13 pp. 1​-13​.​ DOI: https://doi.org/10.1016/j.euprot.2016.09.002 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | 
    ​ ​Computational Detection of Stage-Specific Transcription Factor Clusters during Heart Development​
    Zeidler, S. ; Meckbach, C. ; Tacke, R.; Raad, F. S. ; Roa, A.; Uchida, S. & Zimmermann, W.-H.  et al.​ (2016) 
    Frontiers in Genetics, 7 art. 33​.​ DOI: https://doi.org/10.3389/fgene.2016.00033 
    ​Details  DOI 
  • 2016 | Journal Article | 
    ​ ​Computational Identification of Key Regulators in Two Different Colorectal Cancer Cell Lines​
    Wlochowitz, D.; Haubrock, M. ; Arackal, J.; Bleckmann, A. ; Wolff, A. ; Beißbarth, T.   & Wingender, E.  et al.​ (2016) 
    Frontiers in Genetics, 7 art. 42​.​ DOI: https://doi.org/10.3389/fgene.2016.00042 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article
    ​ ​Connecting high-dimensional mRNA and miRNA expression data for binary medical classification problems​
    Fuchs, M.; Beißbarth, T. ; Wingender, E.   & Jung, K. ​ (2013) 
    Computer Methods and Programs in Biomedicine, 111(3) pp. 592​-601​.​ DOI: https://doi.org/10.1016/j.cmpb.2013.05.013 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Topological peculiarities of mammalian networks with different functionalities: transcription, signal transduction and metabolic networks​
    Goemann, B.; Wingender, E.   & Potapov, A. P. ​ (2011) 
    Network Biology, 1(3-4) pp. 134​-148​.​
    ​Details 

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