Prof. Dr. Burkhard Morgenstern

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  • 2021 | Journal Article | Research Paper | 
    ​ ​A 20‐kb lineage‐specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum​
    Harting, R.; Starke, J.; Kusch, H. ; Pöggeler, S.; Maurus, I.; Schlüter, R. & Landesfeind, M. et al.​ (2021) 
    Molecular Plant Pathology,.​ DOI: https://doi.org/10.1111/mpp.13071 
    ​Details  DOI 
  • 2015 | Journal Article | Research Paper | 
    ​ ​The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology​
    Schmitt-Engel, C.; Schultheis, D.; Schwirz, J.; Stroehlein, N.; Troelenberg, N.; Majumdar, U. & Dao, V. A. et al.​ (2015) 
    Nature Communications, 6 art. 7822​.​ DOI: https://doi.org/10.1038/ncomms8822 
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article | 
    ​ ​jpHMM: recombination analysis in viruses with circular genomes such as the hepatitis B virus​
    Schultz, A.-K.; Bulla, I.; Abdou-Chekaraou, M.; Gordien, E.; Morgenstern, B. ; Zoulim, F. & Deny, P. et al.​ (2012) 
    Nucleic Acids Research, 40(W1) pp. W193​-W198​.​ DOI: https://doi.org/10.1093/nar/gks414 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Detection of viral sequence fragments of HIV-1 subfamilies yet unknown​
    Unterthiner, T.; Schultz, A.-K.; Bulla, J.; Morgenstern, B. ; Stanke, M. & Bulla, I.​ (2011) 
    BMC Bioinformatics, 12 art. 93​.​ DOI: https://doi.org/10.1186/1471-2105-12-93 
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article
    ​ ​jpHMM: improving the reliability of recombination prediction in HIV-1​
    Schultz, A.-K.; Zhang, M.; Bulla, I.; Leitner, T.; Korber, B.; Morgenstern, B.   & Stanke, M.​ (2010) 
    Nucleic Acids Research, 38(3) pp. 1059​-1059​.​ DOI: https://doi.org/10.1093/nar/gkq015 
    ​Details  DOI 
  • 2010 | Journal Article | 
    ​ ​The role of recombination in the emergence of a complex and dynamic HIV epidemic​
    Zhang, M.; Foley, B.; Schultz, A.-K.; Macke, J. P.; Bulla, I.; Stanke, M. & Morgenstern, B.  et al.​ (2010) 
    Retrovirology, 7(25)-15​.​ DOI: https://doi.org/10.1186/1742-4690-7-25 
    ​Details  DOI 
  • 2010 | Journal Article
    ​ ​HIV classification using the coalescent theory​
    Bulla, I.; Schultz, A.-K.; Schreiber, F.; Zhang, M.; Leitner, T.; Korber, B. & Morgenstern, B.  et al.​ (2010) 
    Bioinformatics, 26(11) pp. 1409​-1415​.​ DOI: https://doi.org/10.1093/bioinformatics/btq159 
    ​Details  DOI  PMID  PMC  WoS 
  • 2009 | Journal Article | Research Paper
    ​ ​AUGUSTUS at MediGRID: Adaption of a bioinformatics application to grid computing for efficient genome analysis​
    Sommerfeld, D.; Lingner, T.; Stanke, M.; Morgenstern, B.   & Richter, H.​ (2009) 
    Future Generation Computer Systems, 25(3) pp. 337​-345​.​ DOI: https://doi.org/10.1016/j.future.2008.05.010 
    ​Details  DOI  WoS 
  • 2009 | Journal Article
    ​ ​jpHMM: Improving the reliability of recombination prediction in HIV-1​
    Schultz, A.-K.; Zhang, M.; Bulla, I.; Leitner, T.; Korber, B.; Morgenstern, B.   & Stanke, M.​ (2009) 
    Nucleic Acids Research, 37 pp. W647​-W651​.​ DOI: https://doi.org/10.1093/nar/gkp371 
    ​Details  DOI  PMID  PMC  WoS 
  • 2006 | Journal Article | 
    ​ ​AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome​
    Stanke, M.; Tzvetkova, A. & Morgenstern, B. ​ (2006) 
    Genome Biology, 7 art. S11​.​ DOI: https://doi.org/10.1186/gb-2006-7-s1-s11 
    ​Details  DOI  WoS 
  • 2006 | Journal Article | 
    ​ ​AUGUSTUS: ab initio prediction of alternative transcripts​
    Stanke, M.; Keller, O.; Gunduz, I.; Hayes, A.; Waack, S. & Morgenstern, B. ​ (2006) 
    NUCLEIC ACIDS RESEARCH, 34 pp. W435​-W439​.​ DOI: https://doi.org/10.1093/nar/gkl200 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1​
    Zhang, M.; Schultz, A.-K.; Calef, C.; Kuiken, C.; Leitner, T.; Korber, B. & Morgenstern, B.  et al.​ (2006) 
    NUCLEIC ACIDS RESEARCH, 34 pp. W463​-W465​.​ DOI: https://doi.org/10.1093/nar/gkl255 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes​
    Schultz, A.-K.; Zhang, M.; Leitner, T.; Kuiken, C.; Korber, B.; Morgenstern, B.   & Stanke, M.​ (2006) 
    BMC Bioinformatics, 7 art. 265​.​ DOI: https://doi.org/10.1186/1471-2105-7-265 
    ​Details  DOI  PMID  PMC  WoS 
  • 2006 | Journal Article | 
    ​ ​Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources​
    Stanke, M.; Schoffmann, O.; Morgenstern, B.   & Waack, S.​ (2006) 
    BMC Bioinformatics, 7 art. 62​.​ DOI: https://doi.org/10.1186/1471-2105-7-62 
    ​Details  DOI  PMID  PMC  WoS 
  • 2005 | Journal Article | 
    ​ ​AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints​
    Stanke, M. & Morgenstern, B. ​ (2005) 
    Nucleic Acids Research, 33 pp. W465​-W467​.​ DOI: https://doi.org/10.1093/nar/gki458 
    ​Details  DOI  PMID  PMC  WoS 
  • 2004 | Journal Article | 
    ​ ​AUGUSTUS: a web server for gene finding in eukaryotes​
    Stanke, M.; Steinkamp, R.; Waack, S. & Morgenstern, B. ​ (2004) 
    Nucleic Acids Research, 32 pp. W309​-W312​.​ DOI: https://doi.org/10.1093/nar/gkh379 
    ​Details  DOI  PMID  PMC  WoS 

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https://publications.goettingen-research-online.de URI: /cris/rp/rp34532
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