menoci: Lightweight Extensible Web Portal enabling FAIR Data Management for Biomedical Research Projects

2020-02-07 | preprint. A publication with affiliation to the University of Göttingen.

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​Suhr, Markus, Christoph Lehmann, Christian Robert Bauer, Theresa Bender, Cornelius Knopp, Luca Freckmann, Björn Öst Hansen et al​. "menoci: Lightweight Extensible Web Portal enabling FAIR Data Management for Biomedical Research Projects​." ​Preprint, submitted ​​2020. ​

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Suhr, Markus ; Lehmann, Christoph; Bauer, Christian Robert; Bender, Theresa; Knopp, Cornelius; Freckmann, Luca; Hansen, Björn Öst; Henke, Christian; Aschenbrandt, Georg; Kühlborn, Lea Katharina; Rheinländer, Sophia; Weber, Linus; Marzec, Bartlomiej; Hellkamp, Marcel; Wieder, Philipp ; Kusch, Harald ; Sax, Ulrich ; Nussbeck, Sara Yasemin 
Background: Biomedical research projects deal with data management requirements from multiple sources like funding agencies' guidelines, publisher policies, discipline best practices, and their own users' needs. We describe functional and quality requirements based on many years of experience implementing data management for the CRC 1002 and CRC 1190. A fully equipped data management software should improve documentation of experiments and materials, enable data storage and sharing according to the FAIR Guiding Principles while maximizing usability, information security, as well as software sustainability and reusability. Results: We introduce the modular web portal software menoci for data collection, experiment documentation, data publication, sharing, and preservation in biomedical research projects. Menoci modules are based on the Drupal content management system which enables lightweight deployment and setup, and creates the possibility to combine research data management with a customisable project home page or collaboration platform. Conclusions: Management of research data and digital research artefacts is transforming from individual researcher or groups best practices towards project- or organisation-wide service infrastructures. To enable and support this structural transformation process, a vital ecosystem of open source software tools is needed. Menoci is a contribution to this ecosystem of research data management tools that is specifically designed to support biomedical research projects.
Issue Date
SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz 
SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung 
SFB 1190: Transportmaschinen und Kontaktstellen zellulärer Kompartimente 
SFB 1190 | Z03: Synthetische genetische Analyse, automatisierte Mikroskopie und Bildanalyse 
Working Group
RG Nußbeck 
RG Schwappach (Membrane Protein Biogenesis) 



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