Functional comparison of MERS-coronavirus lineages reveals increased replicative fitness of the recombinant lineage 5
2021 | journal article
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Functional comparison of MERS-coronavirus lineages reveals increased replicative fitness of the recombinant lineage 5
Schroeder, S.; Mache, C.; Kleine-Weber, H.; Corman, V. M.; Muth, D.; Richter, A. & Fatykhova, D. et al. (2021)
Nature Communications, 12(1). DOI: https://doi.org/10.1038/s41467-021-25519-1
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Details
- Authors
- Schroeder, Simon; Mache, Christin; Kleine-Weber, Hannah; Corman, Victor M.; Muth, Doreen; Richter, Anja; Fatykhova, Diana; Memish, Ziad A.; Stanifer, Megan L.; Boulant, Steeve; Drosten, Christian
- Abstract
- Abstract Middle East respiratory syndrome coronavirus (MERS-CoV) is enzootic in dromedary camels across the Middle East and Africa. Virus-induced pneumonia in humans results from animal contact, with a potential for limited onward transmission. Phenotypic changes have been suspected after a novel recombinant clade (lineage 5) caused large nosocomial outbreaks in Saudi Arabia and South Korea in 2016. However, there has been no functional assessment. Here we perform a comprehensive in vitro and ex vivo comparison of viruses from parental and recombinant virus lineages (lineage 3, n = 7; lineage 4, n = 8; lineage 5, n = 9 viruses) from Saudi Arabia, isolated immediately before and after the shift toward lineage 5. Replication of lineage 5 viruses is significantly increased. Transcriptional profiling finds reduced induction of immune genes IFNB1 , CCL5 , and IFNL1 in lung cells infected with lineage 5 strains. Phenotypic differences may be determined by IFN antagonism based on experiments using IFN receptor knock out and signaling inhibition. Additionally, lineage 5 is more resilient against IFN pre-treatment of Calu-3 cells (ca. 10-fold difference in replication). This phenotypic change associated with lineage 5 has remained undiscovered by viral sequence surveillance, but may be a relevant indicator of pandemic potential.
- Issue Date
- 2021
- Journal
- Nature Communications
- Organization
- Deutsches Primatenzentrum
- eISSN
- 2041-1723
- Language
- English