SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung RSS Feed


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  • 2023 | Journal Article | 
    ​ ​Combining a tetracycline (Tet)-inducible gRNA system and CRISPRa for titratable and timely controlled enhancement of endogenous SHISA3 activation in human induced pluripotent stem cells (hiPSC)​
    Priesmeier, L.; Schoger, E.; Cyganek, L. & Zelarayán, L. C. ​ (2023) 
    Stem Cell Research, 71 pp. 103163​.​ DOI: https://doi.org/10.1016/j.scr.2023.103163 
    ​Details  DOI  PMID  PMC 
  • 2023 | Journal Article | 
    ​ ​GBA/GBN-position on the feedback of incidental findings in biobank-based research: consensus-based workflow for hospital-based biobanks​
    Geiger, J.; Fuchs, J.; Starke, M.; Neumann, M.; Baber, R.; Nussbeck, S. Y.   & Kiehntopf, M. et al.​ (2023) 
    European Journal of Human Genetics,.​ DOI: https://doi.org/10.1038/s41431-023-01299-8 
    ​Details  DOI  PMID  PMC 
  • 2023 | Journal Article
    ​ ​Approaching automation of multiple instance orchestration of the menoci web portal​
    Freckmann, L.; Henke, C.; Kossen, R.; Weber, L.; Sax, U.; Nussbeck, S. Y. & Kusch, H.​ (2023) 
    Bausteine Forschungsdatenmanagement, 5 pp. 1​-11​.​ DOI: https://doi.org/10.17192/BFDM.2023.5.8608 
    ​Details  DOI 
  • 2023 | Journal Article | 
    ​ ​Single-cell transcriptomics reveal extracellular vesicles secretion with a cardiomyocyte proteostasis signature during pathological remodeling​
    Schoger, E.; Bleckwedel, F.; Germena, G.; Rocha, C.; Tucholla, P.; Sobitov, I. & Möbius, W.  et al.​ (2023) 
    Communications Biology, 6(1).​ DOI: https://doi.org/10.1038/s42003-022-04402-9 
    ​Details  DOI  PMID  PMC 
  • 2022 | Journal Article
    ​ ​An optimized protocol for the enrichment of small vesicles from murine and non-human primate heart tissue​
    Bleckwedel, F.; Germena, G.; Hinkel, R.   & Zelarayán, L. C. ​ (2022) 
    Trillium Extracellular Vesicles, 4(1) pp. 26​-33​.​ DOI: https://doi.org/10.47184/tev.2022.01.03 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Establishment of two homozygous CRISPR interference (CRISPRi) knock-in human induced pluripotent stem cell (hiPSC) lines for titratable endogenous gene repression​
    Schoger, E.; Zimmermann, W.-H. ; Cyganek, L.   & Zelarayán, L. C. ​ (2021) 
    Stem Cell Research, 55 art. S1873506121003202​.​ DOI: https://doi.org/10.1016/j.scr.2021.102473 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Establishment of a second generation homozygous CRISPRa human induced pluripotent stem cell (hiPSC) line for enhanced levels of endogenous gene activation​
    Schoger, E.; Zimmermann, W.-H. ; Cyganek, L.   & Zelarayán, L. C. ​ (2021) 
    Stem Cell Research, 56 art. S1873506121003652​.​ DOI: https://doi.org/10.1016/j.scr.2021.102518 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Menoci: lightweight extensible web portal enhancing data management for biomedical research projects​
    Suhr, M.; Lehmann, C.; Bauer, C. R.; Bender, T.; Knopp, C.; Freckmann, L. & Öst Hansen, B. et al.​ (2020) 
    BMC Bioinformatics, 21(1).​
    ​Details  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Impact of myocardial fibrosis on left ventricular remodelling, recovery, and outcome after transcatheter aortic valve implantation in different haemodynamic subtypes of severe aortic stenosis​
    Puls, M.; Beuthner, B. E.; Topci, R.; Vogelgesang, A.; Bleckmann, A.; Sitte, M. & Lange, T. et al.​ (2020) 
    European Heart Journal, 41(20) pp. 1903​-1914​.​ DOI: https://doi.org/10.1093/eurheartj/ehaa033 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Interdisciplinary Research on Aortic Valve Stenosis: A Longitudinal Collection of Biospecimens and Clinical Data of Patients Undergoing Transcatheter Aortic Valve Replacement​
    Beuthner, B. E. C.; Topci, R.; Derks, M.; Franke, T.; Seelke, S.; Puls, M. & Schuster, A. et al.​ (2020) 
    Open Journal of Bioresources, 7.​ DOI: https://doi.org/10.5334/ojb.65 
    ​Details  DOI 
  • 2018 | Journal Article | Research Paper | 
    ​ ​A context-specific cardiac β-catenin and GATA4 interaction influences TCF7L2 occupancy and remodels chromatin driving disease progression in the adult heart​
    Iyer, L. M ; Nagarajan, S. ; Woelfer, M.; Schoger, E.; Khadjeh, S. ; Zafiriou, M. P.   & Kari, V.  et al.​ (2018) 
    Nucleic Acids Research, 46(6) pp. 2850​-2867​.​ DOI: https://doi.org/10.1093/nar/gky049 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | Overview
    ​ ​Opinion paper: Data provenance challenges in biomedical research​
    Baum, B. ; Bauer, C. R. ; Franke, T. ; Kusch, H. ; Parciak, M. ; Rottmann, T.   & Umbach, N.  et al.​ (2017) 
    Information Technology, 59(4).​ DOI: https://doi.org/10.1515/itit-2016-0031 
    ​Details  DOI 
  • 2015 | Journal Article | Research Paper
    ​ ​Metadata capture in an electronic notebook: How to make it as simple as possible?: ​Metadatenerfassung in einem elektronischen Laborbuch: Wie macht man es so einfach wie möglich?​
    Menzel, J. ; Weil, P. & Nussbeck, S. Y. ​ (2015) 
    GMS Medizinische Informatik, Biometrie und Epidemiologie, 11(1) pp. 1​-10​.​ DOI: https://doi.org/10.3205/mibe000162 
    ​Details  DOI 
  • 2014 | Journal Article | Research Paper | 
    ​ ​The laboratory notebook in the 21st century The electronic laboratory notebook would enhance good scientific practice and increase research productivity​
    Nussbeck, S. Y. ; Weil, P.; Menzel, J. ; Marzec, B. ; Lorberg, K. & Schwappach, B. ​ (2014) 
    EMBO reports, 15(6) pp. 631​-634​.​ DOI: https://doi.org/10.15252/embr.201338358 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | Research Paper
    ​ ​Archivierung von Genomdaten​
    Gruetz, R.; Mathieu, N.; Loehnhardt, B.; Weil, P. & Krawczak, M.​ (2013) 
    Medizinische Genetik, 25(3) pp. 388​-394​.​ DOI: https://doi.org/10.1007/s11825-013-0403-y 
    ​Details  DOI  WoS 

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