Abteilung Genomische & Angewandte Mikrobiologie

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  • 2023 | Journal Article | 
    ​ ​Brevundimonas and Serratia as host systems for assessing associated environmental viromes and phage diversity by complementary approaches​
    Friedrich, I.; Neubauer, H.; Kuritsyn, A.; Bodenberger, B.; Tskhay, F.; Hartmann, S. & Poehlein, A. et al.​ (2023) 
    Frontiers in Microbiology, 14.​ DOI: https://doi.org/10.3389/fmicb.2023.1095850 
    ​Details  DOI 
  • 2023 | Journal Article | 
    ​ ​Mechanical weeding enhances ecosystem multifunctionality and profit in industrial oil palm​
    Iddris, N. A. Iddris, Najeeb Al-Amin; Formaglio, G.; Paul, C. ; Groß, V. C. von ; Chen, G.; Angulo-Rubiano, A. & Berkelmann, D.  et al.​ (2023) 
    Nature Sustainability,.​ DOI: https://doi.org/10.1038/s41893-023-01076-x 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​The carnitine degradation pathway of Acinetobacter baumannii and its role in virulence​
    Breisch, J.; Schumm, C.; Poehlein, A. ; Daniel, R.   & Averhoff, B.​ (2022) 
    Environmental Microbiology, 24(9) art. 1462-2920.16075​.​ DOI: https://doi.org/10.1111/1462-2920.16075 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Bovine Rumen Microbiome: Impact of DNA Extraction Methods and Comparison of Non-Invasive Sampling Sites​
    Mott, A. C.; Schneider, D.; Hünerberg, M.; Hummel, J.   & Tetens, J. ​ (2022) 
    Ruminants, 2(1) pp. 112​-132​.​ DOI: https://doi.org/10.3390/ruminants2010007 
    ​Details  DOI 
  • 2022 | Journal Article
    ​ ​Pseudocitrobacter corydidari sp. nov., isolated from the Asian emerald cockroach Corydidarum magnifica​
    Guzman, J.; Poehlein, A. ; Glaeser, S. P.; Schwengers, O.; Blom, J.; Hollensteiner, J.   & Kämpfer, P. et al.​ (2022) 
    International Journal of Systematic and Evolutionary Microbiology, 72(8).​ DOI: https://doi.org/10.1099/ijsem.0.005497 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria​
    Zucker, F.; Bischoff, V.; Olo Ndela, E.; Heyerhoff, B.; Poehlein, A. ; Freese, H. M. & Roux, S. et al.​ (2022) 
    Virus Evolution, 8(2) art. veac070​.​ DOI: https://doi.org/10.1093/ve/veac070 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Interference and co-existence of staphylococci and Cutibacterium acnes within the healthy human skin microbiome​
    Ahle, C. M.; Stødkilde, K.; Poehlein, A. ; Bömeke, M.; Streit, W. R.; Wenck, H. & Reuter, J. H. et al.​ (2022) 
    Communications Biology, 5(1).​ DOI: https://doi.org/10.1038/s42003-022-03897-6 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Higher phage virulence accelerates the evolution of host resistance​
    Wendling, C. C.; Lange, J.; Liesegang, H. ; Sieber, M.; Poehlein, A. ; Bunk, B. & Rajkov, J. et al.​ (2022) 
    Proceedings of the Royal Society B: Biological Sciences, 289(1984) art. 20221070​.​ DOI: https://doi.org/10.1098/rspb.2022.1070 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Bacteria-plant interactions synergistically enhance biodegradation of diesel fuel hydrocarbons​
    Eze, M. O.; Thiel, V. ; Hose, G. C.; George, S. C. & Daniel, R. ​ (2022) 
    Communications Earth & Environment, 3(1).​ DOI: https://doi.org/10.1038/s43247-022-00526-2 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​A Novel Carboxylesterase Derived from a Compost Metagenome Exhibiting High Stability and Activity towards High Salinity​
    Lu, M.   & Daniel, R. ​ (2021) 
    Genes, 12(1) pp. 122​.​ DOI: https://doi.org/10.3390/genes12010122 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Screening Methods for Isolation of Biocontrol Epiphytic Yeasts against Penicillium digitatum in Lemons​
    Pereyra, M. M.; Díaz, M. A.; Soliz-Santander, F. F.; Poehlein, A.; Meinhardt, F.; Daniel, R. & Dib, J. R.​ (2021) 
    Journal of Fungi, 7(3) pp. 166​.​ DOI: https://doi.org/10.3390/jof7030166 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Pontibacillus sp. ALD_SL1 and Psychroflexus sp. ALD_RP9, two novel moderately halophilic bacteria isolated from sediment and water from the Aldabra Atoll, Seychelles​
    von Hoyningen-Huene, A. J. E.; Schlotthauer, T. J.; Schneider, D.; Poehlein, A.   & Daniel, R. ​ (2021) 
    PLoS One, 16(8) pp. e0256639​.​ DOI: https://doi.org/10.1371/journal.pone.0256639 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Soil bacterial community structures in relation to different oil palm management practices​
    Berkelmann, D. ; Hennings, N.; Meryandini, A.; Daniel, R.   & Schneider, D.​ (2020) 
    Scientific Data, 7(1).​ DOI: https://doi.org/10.1038/s41597-020-00752-3 
    ​Details  DOI 
  • 2018 | Journal Article | Research Paper | 
    ​ ​How Rainforest Conversion to Agricultural Systems in Sumatra (Indonesia) Affects Active Soil Bacterial Communities​
    Berkelmann, D. ; Schneider, D.; Engelhaupt, M.; Heinemann, M.; Christel, S.; Wijayanti, M. & Meryandini, A. et al.​ (2018) 
    Frontiers in Microbiology, 9 art. 2381​.​ DOI: https://doi.org/10.3389/fmicb.2018.02381 
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Genomic Analysis of the Recent Viral Isolate vB_BthP-Goe4 Reveals Increased Diversity of φ29-Like Phages.​
    Schilling, T.; Hoppert, M. & Hertel, R.​ (2018) 
    Viruses, 10(11) art. 624​.​ DOI: https://doi.org/10.3390/v10110624 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites​
    Amiri Moghaddam, J.; Crüsemann, M.; Alanjary, M.; Harms, H.; Dávila-Céspedes, A.; Blom, J. & Poehlein, A. et al.​ (2018) 
    Scientific Reports, 8(1) art. 16600​.​ DOI: https://doi.org/10.1038/s41598-018-34954-y 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile.​
    Groß, U. ; Brzuszkiewicz, E. B.; Gunka, K. ; Starke, J.; Riedel, T.; Bunk, B. & Spröer, C. et al.​ (2018) 
    BMC Genomics, 19(1) pp. 1​-14​.​ DOI: https://doi.org/10.1186/s12864-017-4368-0 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Prevalence and Strain Characterization of Clostridioides (Clostridium) difficile in Representative Regions of Germany, Ghana, Tanzania and Indonesia - A Comparative Multi-Center Cross-Sectional Study​
    Seugendo, M.; Janssen, I.; Lang, V.; Hasibuan, I.; Bohne, W.; Cooper, P. & Daniel, R. et al.​ (2018) 
    Frontiers in Microbiology, 9 art. 1843​.​ DOI: https://doi.org/10.3389/fmicb.2018.01843 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​A CRISPR-Cas9-Based Toolkit for Fast and Precise In Vivo Genetic Engineering of Bacillus subtilis Phages​
    Schilling, T.; Dietrich, S.; Hoppert, M. & Hertel, R.​ (2018) 
    Viruses, 10(5) art. 241​.​ DOI: https://doi.org/10.3390/v10050241 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Preliminary Investigation of Species Diversity of Rice Hopper Parasitoids in Southeast Asia.​
    Sann, C.; Wemheuer, F. ; Beaurepaire, A.; Daniel, R. ; Erler, S. & Vidal, S. ​ (2018) 
    Insects, 9(1) pp. 1​-12​.​ DOI: https://doi.org/10.3390/insects9010019 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Comparative Genomics and Description of Putative Virulence Factors of Melissococcus plutonius, the Causative Agent of European Foulbrood Disease in Honey Bees​
    Djukic, M.; Erler, S.; Leimbach, A.; Grossar, D.; Charrière, J.-D.; Gauthier, L. & Hartken, D. et al.​ (2018) 
    Genes, 9(8) art. 419​.​ DOI: https://doi.org/10.3390/genes9080419 
    ​Details  DOI  PMID  PMC 

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