Dr. Bernd Wemheuer

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  • 2020 | Journal Article
    ​ ​Seasonal variation in the diet of the serotine bat (Eptesicus serotinus): A high-resolution analysis using DNA metabarcoding​
    Tiede, J. ; Diepenbruck, M.; Gadau, J.; Wemheuer, B. ; Daniel, R.   & Scherber, C. ​ (2020) 
    Basic and Applied Ecology, 49 pp. 1​-12​.​ DOI: https://doi.org/10.1016/j.baae.2020.09.004 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Taxonomic and functional profiling of nitrifying biofilms in freshwater, brackish and marine RAS biofilters​
    Hüpeden, J.; Wemheuer, B. ; Indenbirken, D.; Schulz, C. & Spieck, E.​ (2020) 
    Aquacultural Engineering, 90 pp. 102094​.​ DOI: https://doi.org/10.1016/j.aquaeng.2020.102094 
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges​
    Steinert, G.; Wemheuer, B. ; Janussen, D.; Erpenbeck, D.; Daniel, R. ; Simon, M. & Brinkhoff, T. et al.​ (2019) 
    Frontiers in Marine Science, 6.​ DOI: https://doi.org/10.3389/fmars.2019.00297 
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Mo1947 – Taxonomic and Functional Intestinal Dysbiosis in Children with Cystic Fibrosis​
    Coffey, M. J.; Nielsen, S.; Wemheuer, B. ; Garg, M.; Needham, B.; Jaffe, A. & Thomas, T. et al.​ (2019) 
    Gastroenterology, 156(6) art. S-895​.​ DOI: https://doi.org/10.1016/S0016-5085(19)39210-8 
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Comparative Genomics Reveals Ecological and Evolutionary Insights into Sponge-Associated Thaumarchaeota​
    Zhang, S.; Song, W.; Wemheuer, B. ; Reveillaud, J.; Webster, N. & Thomas, T.​ (2019) 
    mSystems, 4(4).​ DOI: https://doi.org/10.1128/mSystems.00288-19 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Distinct relationships between fluorescence in situ hybridization and 16S rRNA gene- and amplicon-based sequencing data of bacterioplankton lineages​
    Bakenhus, I.; Wemheuer, B. ; Akyol, P.; Giebel, H.-A.; Dlugosch, L.; Daniel, R.   & Simon, M.​ (2019) 
    Systematic and Applied Microbiology, 42(5) art. 126000​.​ DOI: https://doi.org/10.1016/j.syapm.2019.06.005 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Biogeography of the human ocular microbiota​
    Ozkan, J.; Willcox, M.; Wemheuer, B. ; Wilcsek, G.; Coroneo, M. & Thomas, T.​ (2019) 
    The Ocular Surface, 17(1) pp. 111​-118​.​ DOI: https://doi.org/10.1016/j.jtos.2018.11.005 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​The Majority of Active Rhodobacteraceae in Marine Sediments Belong to Uncultured Genera: A Molecular Approach to Link Their Distribution to Environmental Conditions​
    Pohlner, M.; Dlugosch, L.; Wemheuer, B. ; Mills, H.; Engelen, B. & Reese, B. K.​ (2019) 
    Frontiers in Microbiology, 10 art. 659​.​ DOI: https://doi.org/10.3389/fmicb.2019.00659 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Assembly processes of trophic guilds in the root mycobiome of temperate forests​
    Schröter, K.; Wemheuer, B. ; Pena, R. ; Schöning, I.; Ehbrecht, M.; Schall, P.   & Ammer, C.  et al.​ (2019) 
    Molecular Ecology, 28(2) pp. 348​-364​.​ DOI: https://doi.org/10.1111/mec.14887 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Diet and diet-associated bacteria shape early microbiome development in Yellowtail Kingfish (Seriola lalandi)​
    Wilkes Walburn, J.; Wemheuer, B. ; Thomas, T.; Copeland, E.; O'Connor, W.; Booth, M. & Fielder, S. et al.​ (2019) 
    Microbial Biotechnology, 12(2) pp. 275​-288​.​ DOI: https://doi.org/10.1111/1751-7915.13323 
    ​Details  DOI  PMID  PMC 
  • 2018 | Monograph
    ​ ​Molecular ecology and genetic diversity of the Roseobacter clade​ ​
    Daniel, R. ; Simon, M.& Wemheuer, B. ​ (2018)
    Frontiers Media SA. DOI: https://doi.org/10.3389/978-2-88945-538-6 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​P071 Predicting the functional intestinal profiles in cystic fibrosis​
    Coffey, M. J.; Nielsen, S.; Wemheuer, B. ; Needham, B.; Jaffe, A.; Thomas, T. & Ooi, C. Y.​ (2018) 
    Journal of Cystic Fibrosis, 17 pp. S79​.​ DOI: https://doi.org/10.1016/S1569-1993(18)30368-0 
    ​Details  DOI 
  • 2018 | Preprint
    ​ ​Tax4Fun2: a R-based tool for the rapid prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene marker gene sequences​
    Wemheuer, F. ; Taylor, J. A.; Daniel, R. ; Johnston, E.; Meinicke, P. ; Thomas, T.& Wemheuer, B. ​ (2018). DOI: https://doi.org/10.1101/490037 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​The impact of even-aged and uneven-aged forest management on regional biodiversity of multiple taxa in European beech forests​
    Schall, P. ; Goßner, M. M.; Heinrichs, S. ; Fischer, M.; Boch, S.; Prati, D. & Jung, K. et al.​ (2018) 
    Journal of Applied Ecology, 55(1) pp. 267​-278​.​ DOI: https://doi.org/10.1111/1365-2664.12950 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​First Insights into the Draft Genome Sequence of the Endophyte Paenibacillus amylolyticus Strain GM1FR, Isolated from Festuca rubra L.​
    Poehlein, A. ; Hollensteiner, J. ; Granzow, S.; Wemheuer, B. ; Vidal, S.   & Wemheuer, F. ​ (2018) 
    Genome Announcements, 6(4).​ DOI: https://doi.org/10.1128/genomeA.01516-17 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Draft Genome Sequence of the Endophyte Paenibacillus sp. Strain GM2FR Isolated from Festuca rubra​
    Wemheuer, F. ; Wemheuer, B. ; Hollensteiner, J. ; Daniel, R.   & Poehlein, A. ​ (2018) 
    Genome Announcements, 6(6) pp. e00017​-e00018​.​ DOI: https://doi.org/10.1128/genomeA.00017-18 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Identification and Visualization of a Distinct Microbiome in Ocular Surface Conjunctival Tissue​
    Ozkan, J.; Coroneo, M.; Willcox, M.; Wemheuer, B.   & Thomas, T.​ (2018) 
    Investigative Ophthalmology & Visual Science, 59(10) pp. 4268​-4276​.​ DOI: https://doi.org/10.1167/iovs.18-24651 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne​
    Wemheuer, F. ; Hollensteiner, J. ; Poehlein, A. ; Liesegang, H. ; Daniel, R.   & Wemheuer, B. ​ (2018) 
    Genome Announcements, 6(5).​ DOI: https://doi.org/10.1128/genomeA.00011-18 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Editorial Contribution (Editorial, Introduction, Epilogue)
    ​ ​Editorial: Molecular Ecology and Genetic Diversity of the Roseobacter Clade​
    Daniel, R. ; Simon, M. & Wemheuer, B. ​ (2018) 
    Frontiers in Microbiology, 9 art. 1185​.​ DOI: https://doi.org/10.3389/fmicb.2018.01185 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article
    ​ ​Waldbewirtschaftung und Biodiversität: Vielfalt ist gefragt​
    Ammer, C. ; Schall, P. ; Goßner, M. M.; Fischer, M.; Heinrichs, S. ; Boch, S. & Prati, D. et al.​ (2017) 
    AFZ, der Wald, 72(17) pp. 20​-25​.​
    ​Details 
  • 2017 | Journal Article
    ​ ​The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces​
    Pohlner, M.; Degenhardt, J.; von Hoyningen-Huene, A. J. E.; Wemheuer, B. ; Erlmann, N.; Schnetger, B. & Badewien, T. H. et al.​ (2017) 
    Frontiers in Microbiology, 8 art. 2550​.​ DOI: https://doi.org/10.3389/fmicb.2017.02550 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article
    ​ ​Draft Genome Sequence of Pseudomonas putida Strain GM4FR, an Endophytic Bacterium Isolated from Festuca rubra L​
    Wemheuer, F. ; Hollensteiner, J. ; Poehlein, A. ; Granzow, S.; Daniel, R. ; Vidal, S.   & Wemheuer, B. ​ (2017) 
    Genome Announcements, 5(13).​ DOI: https://doi.org/10.1128/genomeA.00086-17 
    ​Details  DOI  PMID  PMC 
  • 2017 | Book Chapter
    ​ ​Extraction of Total DNA and RNA from Marine Filter Samples and Generation of a cDNA as Universal Template for Marker Gene Studies​
    Schneider, D.; Wemheuer, F. ; Pfeiffer, B.  & Wemheuer, B. ​ (2017)
    In:​Streit, W.; Daniel, R.​ (Eds.), Metagenomics. Methods in Molecular Biology pp. 13​-22. (Vol. 1539). ​New York, NY: ​Humana Press. DOI: https://doi.org/10.1007/978-1-4939-6691-2_2 
    ​Details  DOI  PMID  PMC 
  • 2017 | Book Chapter
    ​ ​Assessing Bacterial and Fungal Diversity in the Plant Endosphere​
    Wemheuer, B.  & Wemheuer, F. ​ (2017)
    In:​Streit, W.; Daniel, R.​ (Eds.), Metagenomics. Methods in Molecular Biology pp. 75​-84. (Vol. 1539). ​New York, NY: ​Humana Press. DOI: https://doi.org/10.1007/978-1-4939-6691-2_6 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article
    ​ ​Rhodobacteraceae on the marine brown alga Fucus spiralis are abundant and show physiological adaptation to an epiphytic lifestyle​
    Dogs, M.; Wemheuer, B. ; Wolter, L.; Bergen, N.; Daniel, R. ; Simon, M. & Brinkhoff, T.​ (2017) 
    Systematic and Applied Microbiology, 40(6) pp. 370​-382​.​ DOI: https://doi.org/10.1016/j.syapm.2017.05.006 
    ​Details  DOI  PMID  PMC 
  • 2016 | Conference Paper
    ​ ​Plant diversity affects multitrophic interactions in an experimental grassland​
    Tiede, J. ; Wemheuer, B. ; Traugott, M.; Daniel, R. ; Tscharntke, T. ; Ebeling, A. & Scherber, C. ​ (2016)
    ​150 years of Ecology - lessons for the future pp. 295​-295. ​Annual Meeting of the Ecological Society of Germany, Austria and Switzerland​, Marburg.
    Marburg​: Gesellschaft für Ökologie.
    ​Details 
  • 2016 | Journal Article
    ​ ​Distinct compositions of free-living, particle-associated and benthic communities of the Roseobacter group in the North Sea​
    Kanukollu, S.; Wemheuer, B. ; Herber, J.; Billerbeck, S.; Lucas, J.; Daniel, R.   & Simon, M. et al.​ (2016) 
    FEMS Microbiology Ecology, 92(1) art. fiv145​.​ DOI: https://doi.org/10.1093/femsec/fiv145 
    ​Details  DOI  WoS 
  • 2016 | Journal Article
    ​ ​Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage​
    Billerbeck, S.; Wemheuer, B. ; Voget, S.; Poehlein, A. ; Giebel, H.-A.; Brinkhoff, T. & Gram, L. et al.​ (2016) 
    Nature Microbiology, 1(7) art. 16063​.​ DOI: https://doi.org/10.1038/nmicrobiol.2016.63 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article
    ​ ​Impact of grassland management regimes on bacterial endophyte diversity differs with grass species​
    Wemheuer, F. ; Wemheuer, B. ; Kretzschmar, D.; Pfeiffer, B. ; Herzog, S. ; Daniel, R. T. & Vidal, S. ​ (2016) 
    Letters in Applied Microbiology, 62(4) pp. 323​-329​.​ DOI: https://doi.org/10.1111/lam.12551 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article
    ​ ​Phaeobacter inhibens from the Roseobacter clade has an environmental niche as a surface colonizer in harbors​
    Gram, L.; Rasmussen, B. B.; Wemheuer, B. ; Bernbom, N.; Ng, Y. Y.; Porsby, C. H. & Breider, S. et al.​ (2015) 
    Systematic and Applied Microbiology, 38(7) pp. 483​-493​.​ DOI: https://doi.org/10.1016/j.syapm.2015.07.006 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article
    ​ ​Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans​
    Wietz, M.; Wemheuer, B. ; Simon, H.; Giebel, H.-A.; Seibt, M. A.; Daniel, R.   & Brinkhoff, T. et al.​ (2015) 
    Environmental Microbiology, 17(10) pp. 3822​-3831​.​ DOI: https://doi.org/10.1111/1462-2920.12842 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Conference Paper
    ​ ​Community-level, physiological and genomic characterization of polysaccharide degradation by bacterioplankton from the Southern and Atlantic Oceans​
    Wietz, M.; Wemheuer, B. ; Simon, H.; Giebel, H.-A.; Seibt, M. A.; Daniel, R.   & Mitulla, M. et al.​ (2014)
    ​Gordon Research Conference ‘Marine Microbes’ and ISME-15​, Bentley, USA / Seoul, Korea. DOI: https://doi.org/10.13140/2.1.4778.7527 
    ​Details  DOI 
  • 2014 | Journal Article
    ​ ​Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches​
    Wemheuer, B. ; Güllert, S.; Billerbeck, S.; Giebel, H.-A.; Voget, S.; Simon, M. & Daniel, R. ​ (2014) 
    FEMS Microbiology Ecology, 87(2) pp. 378​-389​.​ DOI: https://doi.org/10.1111/1574-6941.12230 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Thesis | Doctoral Thesis
    ​ ​Diversity and Ecology of the Roseobacter Clade and other Marine Microbes as revealed by Metagenomic and Metatranscriptomic Approaches​
    Wemheuer, B. ​ (2013)
    Georg-August-Universität Göttingen.  DOI: https://doi.org/10.13140/RG.2.1.3655.9522 
    ​Details  DOI 
  • 2013 | Journal Article
    ​ ​Thermostable Xylanase and β-Glucanase Derived from the Metagenome of the Avachinsky Crater in Kamchatka (Russia)​
    Mientus, M.; Brady, S.; Angelov, A.; Zimmermann, P.; Wemheuer, B. ; Schuldes, J. & Daniel, R.  et al.​ (2013) 
    Current Biotechnology, 2(4) pp. 284​-293​.​ DOI: https://doi.org/10.2174/2211550102999131128150257 
    ​Details  DOI 
  • 2013 | Journal Article
    ​ ​High abundance of heterotrophic prokaryotes in hydrothermal springs of the Azores as revealed by a network of 16S rRNA gene-based methods​
    Sahm, K.; John, P.; Nacke, H.; Wemheuer, B. ; Grote, R.; Daniel, R.   & Antranikian, G.​ (2013) 
    Extremophiles, 17(4) pp. 649​-662​.​ DOI: https://doi.org/10.1007/s00792-013-0548-2 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article
    ​ ​Metagenome Survey of a Multispecies and Alga-Associated Biofilm Revealed Key Elements of Bacterial-Algal Interactions in Photobioreactors​
    Krohn-Molt, I.; Wemheuer, B. ; Alawi, M.; Poehlein, A. ; Guellert, S.; Schmeisser, C. & Pommerening-Roeser, A. et al.​ (2013) 
    Applied and Environmental Microbiology, 79(20) pp. 6196​-6206​.​ DOI: https://doi.org/10.1128/AEM.01641-13 
    ​Details  DOI  PMID  PMC  WoS 

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