Prof. Dr. Henner Simianer

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  • 2023 | Journal Article | 
    ​ ​Simianer, Henner, Johannes Heise, Stefan Rensing, Torsten Pook, Johannes Geibel, and Christian Reimer. "How economic weights translate into genetic and phenotypic progress, and vice versa​." ​Genetics Selection Evolution ​55, no. 1 (2023): ​38​. ​https://doi.org/10.1186/s12711-023-00807-0.
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Hosseini, Shahrbanou, Nares Trakooljul, Marc Hirschfeld, Klaus Wimmers, Henner Simianer, Jens Tetens, Ahmad Reza Sharifi, and Bertram Brenig. "Epigenetic Regulation of Phenotypic Sexual Plasticity Inducing Skewed Sex Ratio in Zebrafish​." ​Frontiers in Cell and Developmental Biology ​10 (2022): . ​https://doi.org/10.3389/fcell.2022.880779.
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Westhues, Cathy C., Henner Simianer, and Timothy M. Beissinger. "learnMET: an R package to apply machine learning methods for genomic prediction using multi-environment trial data​." ​G3 Genes|Genomes|Genetics (2022): ​jkac226​. ​https://doi.org/10.1093/g3journal/jkac226.
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Simianer, Henner, Lisa Büttgen, Amudha Ganesan, Ngoc Thuy Ha, and Torsten Pook. "A unifying concept of animal breeding programmes​." ​Journal of Animal Breeding and Genetics ​138, no. 2 (2021): ​137​-150​. ​https://doi.org/10.1111/jbg.12534.
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Pook, Torsten, Christian Reimer, Alexander Freudenberg, Lisa Büttgen, Johannes Geibel, Amudha Ganesan, Ngoc-Thuy Ha, Martin Schlather, Lars Friis Mikkelsen, and Henner Simianer. "The Modular Breeding Program Simulator (MoBPS) allows efficient simulation of complex breeding programs​." ​Animal Production Science (2021): . ​https://doi.org/10.1071/AN21076.
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Simianer, Henner. "Harvest Moon: Some personal thoughts on past and future directions in animal breeding research​." ​Journal of Animal Breeding and Genetics ​138, no. 2 (2021): ​135​-136​. ​https://doi.org/10.1111/jbg.12538.
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Hosseini, Shahrbanou, Armin Otto Schmitt, Jens Tetens, Bertram Brenig, Henner Simianer, Ahmad Reza Sharifi, and Mehmet Gültas. "In Silico Prediction of Transcription Factor Collaborations Underlying Phenotypic Sexual Dimorphism in Zebrafish (Danio rerio)​." ​Genes ​12, no. 6 (2021): ​873​. ​https://doi.org/10.3390/genes12060873.
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Nolte, Tanja, Simon Jansen, Steffen Weigend, Ingrid Halle, Henner Simianer, Ahmad Reza Sharifi, and Daniel Mörlein. "Genotypic and Dietary Effects on Egg Quality of Local Chicken Breeds and Their Crosses Fed with Faba Beans​." ​Animals ​11, no. 7 (2021): ​1947​. ​https://doi.org/10.3390/ani11071947.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Pook, Torsten, Manfred Mayer, Johannes Geibel, Steffen Weigend, David Cavero, Chris C. Schoen, and Henner Simianer. "Improving Imputation Quality in BEAGLE for Crop and Livestock Data​." ​G3: Genes, Genomes, Genetics ​10, no. 1 (2020): ​177​-188​. ​https://doi.org/10.1534/g3.119.400798.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Pook, Torsten, Martin Schlather, and Henner Simianer. "MoBPS - Modular Breeding Program Simulator​." ​G3: Genes, Genomes, Genetics ​10, no. 6 (2020): ​1915​-1918​. ​https://doi.org/10.1534/g3.120.401193.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Oertel, Elisa, and Henner Simianer. "Welcome to the machine: Terms, topics and trends​." ​Journal of Animal Breeding and Genetics ​137, no. 6 (2020): ​521​-522​. ​https://doi.org/10.1111/jbg.12511.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​de los Campos, Gustavo, Torsten Pook, Agustin Gonzalez-Reymundez, Henner Simianer, George Mias, and Ana I. Vazquez. "ANOVA-HD: Analysis of variance when both input and output layers are high-dimensional​." ​PLoS One ​15, no. 12 (2020): ​e0243251​. ​https://doi.org/10.1371/journal.pone.0243251.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Li, Zhengcao, and Henner Simianer. "Pan-genomic open reading frames: A potential supplement of single nucleotide polymorphisms in estimation of heritability and genomic prediction​." ​PLoS Genetics ​16, no. 8 (2020): ​e1008995​. ​https://doi.org/10.1371/journal.pgen.1008995.
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Schrauf, Matías F, Johannes W R Martini, Henner Simianer, Gustavo de los Campos, Rodolfo Cantet, Jan Freudenthal, Arthur Korte, and Sebastián Munilla. "Phantom Epistasis in Genomic Selection: On the Predictive Ability of Epistatic Models​." ​G3 Genes|Genomes|Genetics ​10, no. 9 (2020): ​3137​-3145​. ​https://doi.org/10.1534/g3.120.401300.
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Reimer, Christian, Ngoc-Thuy Ha, Ahmad Reza Sharifi, Johannes Geibel, Lars Friis Mikkelsen, Martin Schlather, Steffen Weigend, and Henner Simianer. "Assessing breed integrity of Göttingen Minipigs​." ​BMC Genomics ​21, no. 1 (2020): ​308​. ​https://doi.org/10.1186/s12864-020-6590-4.
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Pook, Torsten, Jan Freudenthal, Arthur Korte, and Henner Simianer. "Using Local Convolutional Neural Networks for Genomic Prediction​." ​Frontiers in Genetics ​11 (2020): . ​https://doi.org/10.3389/fgene.2020.561497.
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Jansen, Simon, Ulrich Baulain, Christin Habig, Annett Weigend, Ingrid Halle, Armin Manfred Scholz, Henner Simianer, Ahmad Reza Sharifi, and Steffen Weigend. "Relationship between Bone Stability and Egg Production in Genetically Divergent Chicken Layer Lines​." ​Animals ​10, no. 5 (2020): ​850​. ​https://doi.org/10.3390/ani10050850.
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Nolte, Tanja, Simon Jansen, Ingrid Halle, Armin Manfred Scholz, Henner Simianer, Ahmad Reza Sharifi, and Steffen Weigend. "Egg Production and Bone Stability of Local Chicken Breeds and Their Crosses Fed with Faba Beans​." ​Animals ​10, no. 9 (2020): ​1480​. ​https://doi.org/10.3390/ani10091480.
    ​Details  DOI 
  • 2020 | Journal Article | Erratum | 
    ​ ​Jansen, Simon, Ulrich Baulain, Christin Habig, Annett Weigend, Ingrid Halle, Armin Manfred Scholz, Henner Simianer, Ahmad Reza Sharifi, and Steffen Weigend. "Correction: Jansen, S., et al. Relationship between Bone Stability and Egg Production in Genetically Divergent Chicken Layer Lines. Animals 2020, 10, 850​." ​Animals ​10, no. 12 (2020): ​2355​. ​https://doi.org/10.3390/ani10122355.
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Nolte, Tanja, Simon Jansen, Steffen Weigend, Daniel Moerlein, Ingrid Halle, Wolfgang Link, Jürgen Hummel, Henner Simianer, and Ahmad Reza Sharifi. "Growth Performance of Local Chicken Breeds, a High-Performance Genotype and Their Crosses Fed with Regional Faba Beans to Replace Soy​." ​Animals ​10, no. 4 (2020): ​702​. ​https://doi.org/10.3390/ani10040702.
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Pook, Torsten, Martin Schlather, Gustavo de los Campos, Manfred Mayer, Chris Carolin Schoen, and Henner Simianer. "HaploBlocker: Creation of Subgroup-Specific Haplotype Blocks and Libraries​." ​Genetics ​212, no. 4 (2019): ​1045​-1061​. ​https://doi.org/10.1534/genetics.119.302283.
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Hosseini, Shahrbanou, Ngoc-Thuy Ha Ngoc-Thuy Ha, Henner Simianer, Clemens Falker-Gieske, Bertram B. Brenig, Andre Franke, Gabriele Hörstgen-Schwark, Jens Tetens, Sebastian Herzog, and Ahmad R. Sharifi. "Genetic mechanism underlying sexual plasticity and its association with colour patterning in zebrafish (Danio rerio)​." ​BMC Genomics ​20, no. 1 (2019): ​341​. ​https://doi.org/10.1186/s12864-019-5722-1.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Frioni, N., D. Cavero, H. Simianer, and M. Erbe. "Phasing quality assessment in a brown layer population through family- and population-based software​." ​BMC Genetics ​20, no. 1 (2019): ​57​. ​https://doi.org/10.1186/s12863-019-0759-3.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Malomane, Dorcus K., Henner Simianer, Annett Weigend, Christian Reimer, Armin O. Schmitt, and Steffen Weigend. "The SYNBREED chicken diversity panel: a global resource to assess chicken diversity at high genomic resolution​." ​BMC Genomics ​20, no. 1 (2019): ​345​. ​https://doi.org/10.1186/s12864-019-5727-9.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Simianer, Henner. "Of Cows and Cars​." ​Journal of Animal Breeding and Genetics ​135, no. 4 (2018): ​249​-250​. ​https://doi.org/10.1111/jbg.12344.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Beissinger, Tim, Jochen Kruppa, David Cavero, Ngoc-Thuy Ha, Malena Erbe, and Henner Simianer. "A Simple Test Identifies Selection on Complex Traits​." ​Genetics ​209, no. 1 (2018): ​321​-333​. ​https://doi.org/10.1534/genetics.118.300857.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Heise, Johannes, Kathrin F. Stock, Friedrich Reinhardt, Ngoc-Thuy Ha, and Henner Simianer. "Phenotypic and genetic relationships between age at first calving, its component traits, and survival of heifers up to second calving​." ​Journal of Dairy Science ​101, no. 1 (2018): ​425​-432​. ​https://doi.org/10.3168/jds.2017-12957.
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Cardoso, Diercles F., Lucia Galvão de Albuquerque, Christian Reimer, Saber Qanbari, Malena Erbe, André V. do Nascimento, Guilherme C. Venturini et al. "Genome-wide scan reveals population stratification and footprints of recent selection in Nelore cattle​." ​Genetics Selection Evolution ​50, no. 1 (2018): . ​https://doi.org/10.1186/s12711-018-0381-2.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Szyda, Joanna, Tomasz Suchocki, Saber Qanbari, Zengting Liu, and Henner Simianer. "Assessing the degree of stratification between closely related Holstein-Friesian populations​." ​Journal of Applied Genetics ​58, no. 4 (2017): ​521​-526​. ​https://doi.org/10.1007/s13353-017-0409-2.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Ni, G., S. Kipp, H. Simianer, and M. Erbe. "Accuracy of genomic breeding values revisited: Assessment of two established approaches and a novel one to determine the accuracy in two-step genomic prediction​." ​Journal of Animal Breeding and Genetics ​134, no. 3 (2017): ​242​-255​. ​https://doi.org/10.1111/jbg.12273.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Gao, Ning, Johannes W. R. Martini, Zhe Zhang, Xiaolong Yuan, Hao Zhang, Henner Simianer, and Jiaqi Li. "Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes​." ​Genetics (2017): ​genetics.300198.2017​. ​https://doi.org/10.1534/genetics.117.300198.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Ha, N.-T., C. Drögemüller, C. Reimer, F. Schmitz-Hsu, R.M. Bruckmaier, H. Simianer, and J.J. Gross. "Liver transcriptome analysis reveals important factors involved in the metabolic adaptation of the transition cow​." ​Journal of Dairy Science ​100, no. 11 (2017): ​9311​-9323​. ​https://doi.org/10.3168/jds.2016-12454.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Fangmann, A., R. A. Sharifi, J. Heinkel, K. Danowski, H. Schrade, M. Erbe, and H. Simianer. "Empirical comparison between different methods for genomic prediction of number of piglets born alive in moderate sized breeding populations1​." ​Journal of Animal Science ​95, no. 4 (2017): ​1434​-1443​. ​https://doi.org/10.2527/jas.2016.0991.
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Lecture
    ​ ​Simianer, Henner. "Genomische und andere Revolutionen in der Tierzucht​." ​Lecture presented at the Landwirtschaft zwischen Idylle und Hightech​, Göttingen, 2016. 
    ​Details 
  • 2016 | Journal Article
    ​ ​Simianer, Henner. "Genomic and other revolutions—why some technologies are quickly adopted and others are not​." ​Animal frontiers ​6, no. 1 (2016): ​53​-58​. ​https://doi.org/10.2527/af.2016-0008.
    ​Details  DOI 
  • 2016 | Journal Article
    ​ ​Ibanez-Escriche, Noelia, and Henner Simianer. "From the Editors: Animal breeding in the genomics era​." ​Animal frontiers ​6, no. 1 (2016): ​4​-5​. ​https://doi.org/10.2527/af.2016-0001.
    ​Details  DOI 
  • 2009 | Journal Article
    ​ ​Pashmi, M., Saber Qanbari, S. A. Ghorashi, Ahmad Reza Sharifi, and Henner Simianer. "Analysis of Relationship between Bovine Lymphocyte Antigen DRB3.2 Alleles, Somatic Cell Count and milk Traits in Iranian Holstein Population​." ​Journal of Animal Breeding and Genetics ​126, no. 4 (2009): ​296​-303​. ​https://doi.org/10.1111/j.1439-0388.2008.00783.x.
    ​Details  DOI  PMID  PMC  WoS 

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