Widefield deconvolution epifluorescence microscopy combined with fluorescence in situ hybridization reveals the spatial arrangement of bacteria in sponge tissue

2000 | journal article. A publication with affiliation to the University of Göttingen.

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​Widefield deconvolution epifluorescence microscopy combined with fluorescence in situ hybridization reveals the spatial arrangement of bacteria in sponge tissue​
Manz, W.; Arp, G. ; Schumann-Kindel, G.; Szewzyk, U. & Reitner, J. ​ (2000) 
Journal of Microbiological Methods40(2) pp. 125​-134​.​ DOI: https://doi.org/10.1016/S0167-7012(99)00103-7 

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Authors
Manz, W.; Arp, Gernot ; Schumann-Kindel, G.; Szewzyk, U.; Reitner, Joachim 
Abstract
Widefield deconvolution epifluorescence microscopy (WDEM) combined with fluorescence in situ hybridization (FISH) was performed to identify and characterize single bacterial cells within sections of the mediterranean sponge Chondrosia reniformis. Sponges were embedded in paraffin wax or plastic prior to the preparation of thin sections, in situ hybridization and microscopy. Serial digital images generated by widefield epifluorescence microscopy were visualized using an exhaustive photon reassignment deconvolution algorithm and three-dimensional rendering software. Computer processing of series of images taken at different focal planes with the deconvolution technique provided deblurred three-dimensional images with high optical resolution on a submicron scale. Results from the deconvolution enhanced widefield microscopy were compared with conventional epifluorescent microscopical images. By the application of the deconvolution algorithm on digital image data obtained with widefield epifluorescence microscopy after FISH, the occurrence and spatial arrangement of Desulfovibrionaceae closely associated with micropores of Chondrosia reniformis could be visualized. (C) 2000 Elsevier Science B.V. All rights reserved.
Issue Date
2000
Journal
Journal of Microbiological Methods 
Organization
Fakultät für Geowissenschaften und Geographie
ISSN
0167-7012

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