Andrea C. Vaiana

Name Card

Staff Status
campusgoe
 

1-17 of 17
 
The bibliographical data in your publication list are complete
You can correct existing data in the blue highlighted fields.To do this, please click on the coloured field. It is not possible to delete data here.
Fields that are not marked in colour (e. g. the authors) can be edited using the input form. To do so, click on the in front of the respective publication.
The bibliographic data in your publication list may be incomplete. You can
  • add any missing data in the fields marked in red or
  • correct existing data in the blue highlighted fields.
To do this, please click on the coloured field. It is not possible to delete data here.
Fields that are not marked in colour (e. g. the authors) can be edited using the input form. To do so, click on the in front of the respective publication.
Check/Uncheck all
  • 2019 | Journal Article | 
    ​ ​Automated cryo-EM structure refinement using correlation-driven molecular dynamics​
    Igaev, M.; Kutzner, C.; Bock, L. V. ; Vaiana, A. C.   & Grubmüller, H. ​ (2019) 
    eLife, 8.​ DOI: https://doi.org/10.7554/eLife.43542 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P​
    Huter, P.; Arenz, S.; Bock, L. V. ; Graf, M.; Frister, J. O.; Heuer, A. & Peil, L. et al.​ (2017) 
    Molecular cell, 68(3) pp. 515.e6​-527.e6​.​ DOI: https://doi.org/10.1016/j.molcel.2017.10.014 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | 
    ​ ​A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrest​
    Arenz, S.; Bock, L. V. ; Graf, M.; Innis, C. A.; Beckmann, R.; Grubmüller, H.   & Vaiana, A. C.  et al.​ (2016) 
    Nature communications, 7 art. 12026​.​ DOI: https://doi.org/10.1038/ncomms12026 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article
    ​ ​ErmBL Translation on the Ribosome in the Presence of Erythromycin is Stalled by Inhibition of Peptide Bond Formation​
    Bock, L. V. ; Arenz, S.; Wilson, D. N.; Grubmüller, H.   & Vaiana, A. C. ​ (2016) 
    Biophysical Journal, 110(3) pp. 234a​.​ DOI: https://doi.org/10.1016/j.bpj.2015.11.1291 
    ​Details  DOI 
  • 2016 | Journal Article
    ​ ​Low Energy Barriers and a Dynamic Contact Network between Ribosomal Subunits Enable Rapid tRNA Translocation​
    Bock, L. V. ; Blau, C. ; Vaiana, A. C.   & Grubmüller, H. ​ (2016) 
    Biophysical Journal, 110(3) pp. 3a​.​ DOI: https://doi.org/10.1016/j.bpj.2015.11.061 
    ​Details  DOI 
  • 2015 | Journal Article
    ​ ​Dynamic contact network between ribosomal subunits enables rapid large-scale rotation during spontaneous translocation​
    Bock, L. V. ; Blau, C. ; Vaiana, A. C.   & Grubmüller, H. ​ (2015) 
    Nucleic Acids Research, 43(14) pp. 6747​-6760​.​ DOI: https://doi.org/10.1093/nar/gkv649 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article
    ​ ​Bayesian cryo-EM Refinement​
    Blau, C. ; Bock, L. ; Kutzner, C.; Vaiana, A.   & Grubmüller, H. ​ (2015) 
    Biophysical Journal, 108(2) pp. 470a​.​ DOI: https://doi.org/10.1016/j.bpj.2014.11.2571 
    ​Details  DOI 
  • 2015 | Journal Article
    ​ ​Structural Determinants of Hybrid State Intermediates of the Bacterial Ribosome​
    Vaiana, A. C. ; Kutzner, C.; Bock, L. V. ; Blau, C.   & Grubmüller, H. ​ (2015) 
    Biophysical Journal, 108(2) pp. 318a​.​ DOI: https://doi.org/10.1016/j.bpj.2014.11.1730 
    ​Details  DOI 
  • 2015 | Journal Article
    ​ ​Balanced Interactions between Ribosomal Subunits Allow Rapid Large-Scale Rotation​
    Bock, L. V. ; Blau, C. ; Vaiana, A. C.   & Grubmüller, H. ​ (2015) 
    Biophysical Journal, 108(2) pp. 26a​.​ DOI: https://doi.org/10.1016/j.bpj.2014.11.168 
    ​Details  DOI 
  • 2014 | Journal Article
    ​ ​Refining Crystal Structures Against Cryo-EM Data using Molecular Dynamics Simulations to Obtain a Complete Atomistic Pathway of Transfer RNA Translocation​
    Vaiana, A. C. ; Kutzner, C.; Bock, L. V. ; Blau, C.   & Grubmüller, H. ​ (2014) 
    Biophysical Journal, 106(2) pp. 240a​.​ DOI: https://doi.org/10.1016/j.bpj.2013.11.1405 
    ​Details  DOI 
  • 2014 | Journal Article
    ​ ​Concerted Interactions between Ribosomal Subunits Allow for Large-Scale Rotations​
    Bock, L. V. ; Blau, C. ; Vaiana, A. C.   & Grubmüller, H. ​ (2014) 
    Biophysical Journal, 106(2) pp. 491a​.​ DOI: https://doi.org/10.1016/j.bpj.2013.11.2748 
    ​Details  DOI 
  • 2014 | Conference Abstract
    ​ ​Ribosomal Kinetics and Concerted Motions from Nanoseconds to Seconds​
    Blau, C. ; Bock, L. V. ; Schröder, G. F.; Davydov, I. I.; Fischer, N. ; Stark, H.   & Rodnina, M. V.  et al.​ (2014)
    ​Biophysical Journal , Volume 106 , Issue 2 , 250a p. 1266-Plat. ​58th Annual Meeting of the Biophysical-Society​, San Francisco, CA.
    Cambridge​: Cell Press. DOI: https://doi.org/10.1016/j.bpj.2013.11.1463 
    ​Details  DOI  WoS 
  • 2014 | Conference Abstract
    ​ ​Rapid and Stable Transfer RNA Translocation through the Ribosome Ensured by Specific Contact Mechanisms​
    Bock, L. V. ; Blau, C. ; Schröder, G. F.; Davydov, I. I.; Fischer, N. ; Stark, H.   & Rodnina, M. V.  et al.​ (2014)
    ​Biophysical Journal, 106(Supplement 1), 493a-493a.. ​58th Annual Meeting of the Biophysical-Society​, San Francisco, CA.
    Cambridge​: Cell Press. DOI: https://doi.org/10.1016/j.bpj.2013.11.2758 
    ​Details  DOI  WoS 
  • 2013 | Journal Article
    ​ ​Rate Estimates from Sampling Sparse Transitions: TRNA Motion Limits Transitions between Ribosomal Translocation Intermediates​
    Blau, C. ; Bock, L. V. ; Schröder, G. F.; Fischer, N. ; Stark, H. ; Rodnina, M. V.   & Vaiana, A. C.  et al.​ (2013) 
    Biophysical Journal, 104(2) pp. 663a​.​ DOI: https://doi.org/10.1016/j.bpj.2012.11.3662 
    ​Details  DOI 
  • 2013 | Journal Article
    ​ ​Mechanisms for Efficient TRNA Translocation through the Ribosome​
    Bock, L. V. ; Blau, C. ; Schröder, G. F.; Fischer, N. ; Stark, H. ; Rodnina, M. V.   & Vaiana, A. C.  et al.​ (2013) 
    Biophysical Journal, 104(2) pp. 16a​.​ DOI: https://doi.org/10.1016/j.bpj.2012.11.118 
    ​Details  DOI 
  • 2013 | Journal Article | Research Paper
    ​ ​Energy barriers and driving forces in tRNA translocation through the ribosome​
    Bock, L. V. ; Blau, C. ; Schroeder, G. F.; Davydov, I. I.; Fischer, N. ; Stark, H.   & Rodnina, M. V.  et al.​ (2013) 
    Nature Structural & Molecular Biology, 20(12) pp. 1390​-1396​.​ DOI: https://doi.org/10.1038/nsmb.2690 
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article
    ​ ​Contacts Between Ribosome Parts Refined by Molecular Dynamics Simulations​
    Blau, C. ; Bock, L. V. ; Schroeder, G. F.; Fischer, N. ; Stark, H. ; Vaiana, A. C.   & Grubmüller, H. ​ (2012) 
    Biophysical Journal, 102(3) pp. 69a​.​ DOI: https://doi.org/10.1016/j.bpj.2011.11.405 
    ​Details  DOI 

Publication List

All Articles (Book & Journal) Conference objects Articles & Preprints Papers (Journal & Conference)

Type

Subtype

Date issued

Author

Peer-Reviewed

Language

Fulltext

Options

Citation Style

GRO View APA Chicago MLA Vancouver
https://publications.goettingen-research-online.de URI: /cris/rp/rp05878
ID: 0000000
PREF: default TOKEN:

0

Sort

Issue Date
ASC DESC
Title
ASC DESC

Embed

JavaScript
Link

Export

Activate Export Mode
Deactivate Export Mode

Select some or all items (max. 800 for CSV/Excel) from the publications list, then choose an export format below.