Prof. Dr. Burkhard Morgenstern

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  • 2022 | Journal Article | 
    ​ ​Insertions and deletions as phylogenetic signal in an alignment-free context​
    Birth, N.; Dencker, T. & Morgenstern, B. ​ (2022) 
    PLOS Computational Biology, 18(8) pp. e1010303​.​ DOI: https://doi.org/10.1371/journal.pcbi.1010303 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​A 20‐kb lineage‐specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum​
    Harting, R.; Starke, J.; Kusch, H. ; Pöggeler, S.; Maurus, I.; Schlüter, R. & Landesfeind, M. et al.​ (2021) 
    Molecular Plant Pathology,.​ DOI: https://doi.org/10.1111/mpp.13071 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Verticillium longisporum Elicits Media-Dependent Secretome Responses With Capacity to Distinguish Between Plant-Related Environments​
    Leonard, M.; Kühn, A.; Harting, R.; Maurus, I.; Nagel, A.; Starke, J. & Kusch, H.  et al.​ (2020) 
    Frontiers in Microbiology, 11.​ DOI: https://doi.org/10.3389/fmicb.2020.01876 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​The number of k-mer matches between two DNA sequences as a function of k and applications to estimate phylogenetic distances​
    Röhling, S.; Linne, A.; Schellhorn, J. ; Hosseini, M.; Dencker, T. & Morgenstern, B. ​ (2020) 
    PLoS One, 15(2) pp. e0228070​.​ DOI: https://doi.org/10.1371/journal.pone.0228070 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Benchmarking of alignment-free sequence comparison methods​
    Zielezinski, A.; Girgis, H. Z.; Bernard, G.; Leimeister, C.-A.; Tang, K.; Dencker, T. & Lau, A. K. et al.​ (2019) 
    Genome Biology, 20(1).​ DOI: https://doi.org/10.1186/s13059-019-1755-7 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage​
    Lau, A.-K.; Dörrer, S.; Leimeister, C.-A.; Bleidorn, C.   & Morgenstern, B. ​ (2019) 
    BMC Bioinformatics, 20(Suppl 20) art. 638​.​ DOI: https://doi.org/10.1186/s12859-019-3205-7 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | 
    ​ ​Phylogeny reconstruction based on the length distribution of k-mismatch common substrings​
    Morgenstern, B. ; Schöbel, S. & Leimeister, C.-A.​ (2017) 
    Algorithms for Molecular Biology, 12(1) art. 27​.​ DOI: https://doi.org/10.1186/s13015-017-0118-8 
    ​Details  DOI 
  • 2010 | Journal Article | 
    ​ ​The role of recombination in the emergence of a complex and dynamic HIV epidemic​
    Zhang, M.; Foley, B.; Schultz, A.-K.; Macke, J. P.; Bulla, I.; Stanke, M. & Morgenstern, B.  et al.​ (2010) 
    Retrovirology, 7(25)-15​.​ DOI: https://doi.org/10.1186/1742-4690-7-25 
    ​Details  DOI 
  • 2008 | Journal Article | 
    ​ ​DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment​
    Subramanian, A. R.; Kaufmann, M. & Morgenstern, B. ​ (2008) 
    Algorithms for molecular biology, 3(6) pp. 1​-11​.​
    ​Details 
  • 2006 | Journal Article | 
    ​ ​AUGUSTUS: ab initio prediction of alternative transcripts​
    Stanke, M.; Keller, O.; Gunduz, I.; Hayes, A.; Waack, S. & Morgenstern, B. ​ (2006) 
    NUCLEIC ACIDS RESEARCH, 34 pp. W435​-W439​.​ DOI: https://doi.org/10.1093/nar/gkl200 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1​
    Zhang, M.; Schultz, A.-K.; Calef, C.; Kuiken, C.; Leitner, T.; Korber, B. & Morgenstern, B.  et al.​ (2006) 
    NUCLEIC ACIDS RESEARCH, 34 pp. W463​-W465​.​ DOI: https://doi.org/10.1093/nar/gkl255 
    ​Details  DOI 
  • 2002 | Journal Article | 
    ​ ​MIPS: a database for genomes and protein sequences.​
    Mewes, H. W.; Frishman, D.; Güldener, U.; Mannhaupt, G.; Mayer, K.; Mokrejs, M. & Morgenstern, B.  et al.​ (2002) 
    NUCLEIC ACIDS RESEARCH, 30(1) pp. 31​-34​.​
    ​Details 

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