BMC Genomics

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  • 2024 | Journal Article | 
    ​ ​Genomic dissection of the correlation between milk yield and various health traits using functional and evolutionary information about imputed sequence variants of 34,497 German Holstein cows​
    Schneider, H.; Krizanac, A.-M.; Falker-Gieske, C.; Heise, J.; Tetens, J.; Thaller, G. & Bennewitz, J.​ (2024) 
    BMC Genomics, 25(1) art. 265​.​ DOI: https://doi.org/10.1186/s12864-024-10115-6 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​In the battle of the disease: a transcriptomic analysis of European foulbrood-diseased larvae of the Western honey bee (Apis mellifera)​
    Lewkowski, O.; Poehlein, A. ; Daniel, R.   & Erler, S.​ (2022) 
    BMC Genomics, 23(1) art. 837​.​ DOI: https://doi.org/10.1186/s12864-022-09075-6 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​The mitochondrial genome sequence of Abies alba Mill. reveals a high structural and combinatorial variation​
    Kersten, B.; Rellstab, C.; Schroeder, H.; Brodbeck, S.; Fladung, M.; Krutovsky, K. V.   & Gugerli, F.​ (2022) 
    BMC Genomics, 23(1) art. 776​.​ DOI: https://doi.org/10.1186/s12864-022-08993-9 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Structural variants and tandem repeats in the founder individuals of four F2 pig crosses and implications to F2 GWAS results​
    Blaj, I.; Tetens, J. ; Bennewitz, J.; Thaller, G. & Falker-Gieske, C.​ (2022) 
    BMC Genomics, 23(1) art. 631​.​ DOI: https://doi.org/10.1186/s12864-022-08716-0 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper
    ​ ​Assessment of linkage disequilibrium patterns between structural variants and single nucleotide polymorphisms in three commercial chicken populations​
    Geibel, J.; Praefke, N. P.; Weigend, S.; Simianer, H. & Reimer, C.​ (2022) 
    BMC Genomics, 23(1) art. 193​.​ DOI: https://doi.org/10.1186/s12864-022-08418-7 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Gene expression profile of placentomes and clinical parameters in the cows with retained placenta​
    Moradi, M.; Zhandi, M.; Sharafi, M.; Akbari, A.; Atrabi, M. J. & Totonchi, M.​ (2022) 
    BMC Genomics, 23(1).​ DOI: https://doi.org/10.1186/s12864-022-08989-5 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Genome-wide association study for deoxynivalenol production and aggressiveness in wheat and rye head blight by resequencing 92 isolates of Fusarium culmorum​
    Miedaner, T.; Vasquez, A.; Castiblanco, V.; Castillo, H. E.; Foroud, N.; Würschum, T. & Leiser, W.​ (2021) 
    BMC Genomics, 22(1) art. 630​.​ DOI: https://doi.org/10.1186/s12864-021-07931-5 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​The global gene expression outline of the bovine blastocyst: reflector of environmental conditions and predictor of developmental capacity​
    Salilew-Wondim, D.; Tesfaye, D.; Rings, F.; Held-Hoelker, E.; Miskel, D.; Sirard, M.-A. & Tholen, E. et al.​ (2021) 
    BMC Genomics, 22(1) art. 408​.​ DOI: https://doi.org/10.1186/s12864-021-07693-0 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​How imputation can mitigate SNP ascertainment Bias​
    Geibel, J.; Reimer, C.; Pook, T.; Weigend, S.; Weigend, A. & Simianer, H.​ (2021) 
    BMC Genomics, 22(1) art. 340​.​ DOI: https://doi.org/10.1186/s12864-021-07663-6 
    ​Details  DOI 
  • 2021 | Journal Article | 
    ​ ​Mitogenomic phylogeny of Callithrix with special focus on human transferred taxa​
    Malukiewicz, J.; Cartwright, R. A.; Curi, N. H. A.; Dergam, J. A.; Igayara, C. S.; Moreira, S. B. & Molina, C. V. et al.​ (2021) 
    BMC Genomics, 22(1) art. 239​.​ DOI: https://doi.org/10.1186/s12864-021-07533-1 
    ​Details  DOI 
  • 2021 | Journal Article | 
    ​ ​Multi-species transcriptome meta-analysis of the response to retinoic acid in vertebrates and comparative analysis of the effects of retinol and retinoic acid on gene expression in LMH cells​
    Falker-Gieske, C.; Mott, A.; Franzenburg, S. & Tetens, J.​ (2021) 
    BMC Genomics, 22(1) art. 146​.​ DOI: https://doi.org/10.1186/s12864-021-07451-2 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known mitogenome​
    Putintseva, Y. A.; Bondar, E. I.; Simonov, E. P.; Sharov, V. V.; Oreshkova, N. V.; Kuzmin, D. A. & Konstantinov, Y. M. et al.​ (2020) 
    BMC Genomics, 21(1).​ DOI: https://doi.org/10.1186/s12864-020-07061-4 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data​
    Peripolli, E.; Reimer, C.; Ha, N.-T.; Geibel, J. ; Machado, M. A.; Panetto, J. C. do C. & do Egito, A. A. et al.​ (2020) 
    BMC Genomics, 21(1) art. 624​.​ DOI: https://doi.org/10.1186/s12864-020-07035-6 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Analysis of the brain transcriptome in lines of laying hens divergently selected for feather pecking​
    Falker-Gieske, C.; Mott, A.; Preuß, S.; Franzenburg, S.; Bessei, W.; Bennewitz, J. & Tetens, J.​ (2020) 
    BMC Genomics, 21(1).​ DOI: https://doi.org/10.1186/s12864-020-07002-1 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Enhanced genome assembly and a new official gene set for Tribolium castaneum​
    Herndon, N.; Shelton, J.; Gerischer, L.; Ioannidis, P.; Ninova, M.; Dönitz, J. & Waterhouse, R. M et al.​ (2020) 
    BMC Genomics, 21(1) art. 47​.​ DOI: https://doi.org/10.1186/s12864-019-6394-6 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper
    ​ ​De novo sequencing, assembly and functional annotation of Armillaria borealis genome​
    Akulova, V. S.; Sharov, V. V.; Aksyonova, A. I.; Putintseva, Y. A.; Oreshkova, N. V.; Feranchuk, S. I. & Kuzmin, D. A. et al.​ (2020) 
    BMC Genomics, 21(S7).​ DOI: https://doi.org/10.1186/s12864-020-06964-6 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Diverse and unique viruses discovered in the surface water of the East China Sea​
    Wu, S.; Zhou, L.; Zhou, Y.; Wang, H.; Xiao, J.; Yan, S.   & Wang, Y.​ (2020) 
    BMC Genomics, 21(1).​ DOI: https://doi.org/10.1186/s12864-020-06861-y 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Genomic variation among closely related Vibrio alginolyticus strains is located on mobile genetic elements​
    Chibani, C. M.; Roth, O.; Liesegang, H.   & Wendling, C. C.​ (2020) 
    BMC Genomics, 21(1).​ DOI: https://doi.org/10.1186/s12864-020-6735-5 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Assessing breed integrity of Göttingen Minipigs​
    Reimer, C.; Ha, N.-T.; Sharifi, A. R. ; Geibel, J. ; Mikkelsen, L. F.; Schlather, M. & Weigend, S. et al.​ (2020) 
    BMC Genomics, 21(1) art. 308​.​ DOI: https://doi.org/10.1186/s12864-020-6590-4 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Comparative transcriptomics in Syllidae (Annelida) indicates that posterior regeneration and regular growth are comparable, while anterior regeneration is a distinct process​
    Ribeiro, R. P.; Ponz-Segrelles, G.; Bleidorn, C.   & Aguado, M. T.​ (2019) 
    BMC Genomics, 20(1).​ DOI: https://doi.org/10.1186/s12864-019-6223-y 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Pathological changes are associated with shifts in the employment of synonymous codons at the transcriptome level​
    Fornasiero, E. F.   & Rizzoli, S. O. ​ (2019) 
    BMC Genomics, 20(1).​ DOI: https://doi.org/10.1186/s12864-019-5921-9 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​The SYNBREED chicken diversity panel: a global resource to assess chicken diversity at high genomic resolution​
    Malomane, D. K.; Simianer, H. ; Weigend, A.; Reimer, C.; Schmitt, A. O.   & Weigend, S.​ (2019) 
    BMC Genomics, 20(1) art. 345​.​ DOI: https://doi.org/10.1186/s12864-019-5727-9 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Genetic mechanism underlying sexual plasticity and its association with colour patterning in zebrafish (Danio rerio)​
    Hosseini, S. ; Ngoc-Thuy Ha, N. Ngoc-Thuy Ha, Ngoc-Thuy Ha; Simianer, H. ; Falker-Gieske, C.; Brenig, B. B. ; Franke, A. & Hörstgen-Schwark, G. et al.​ (2019) 
    BMC Genomics, 20(1) art. 341​.​ DOI: https://doi.org/10.1186/s12864-019-5722-1 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Mobile genetic elements explain size variation in the mitochondrial genomes of four closely-related Armillaria species​
    Kolesnikova, A. I.; Putintseva, Y. A.; Simonov, E. P.; Biriukov, V. V.; Oreshkova, N. V.; Pavlov, I. N. & Sharov, V. V. et al.​ (2019) 
    BMC Genomics, 20(1) art. 351​.​ DOI: https://doi.org/10.1186/s12864-019-5732-z 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​The genome of a prasinoviruses-related freshwater virus reveals unusual diversity of phycodnaviruses​
    Chen, H.; Zhang, W.; Li, X.; Pan, Y.; Yan, S.   & Wang, Y.​ (2018) 
    BMC Genomics, 19(1).​ DOI: https://doi.org/10.1186/s12864-018-4432-4 
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Analysis of porcine body size variation using re-sequencing data of miniature and large pigs​
    Reimer, C.; Rubin, C.-J.; Sharifi, A. R; Ha, N.-T.; Weigend, S.; Waldmann, K.-H. & Distl, O. et al.​ (2018) 
    BMC Genomics, 19(1) art. 687​.​ DOI: https://doi.org/10.1186/s12864-018-5009-y 
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile.​
    Groß, U. ; Brzuszkiewicz, E. B.; Gunka, K. ; Starke, J.; Riedel, T.; Bunk, B. & Spröer, C. et al.​ (2018) 
    BMC Genomics, 19(1) pp. 1​-14​.​ DOI: https://doi.org/10.1186/s12864-017-4368-0 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Efficiency of different strategies to mitigate ascertainment bias when using SNP panels in diversity studies.​
    Malomane, D. K.; Reimer, C.; Weigend, S.; Weigend, A.; Sharifi, A. R. & Simianer, H.​ (2018) 
    BMC Genomics, 19(1) art. 22​.​ DOI: https://doi.org/10.1186/s12864-017-4416-9 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | 
    ​ ​ddRADseq reveals determinants for temperature-dependent sex reversal in Nile tilapia on LG23​
    Wessels, S.; Krause, I.; Floren, C.; Schütz, E.; Beck, J. & Knorr, C.​ (2017) 
    BMC Genomics, 18(1).​ DOI: https://doi.org/10.1186/s12864-017-3930-0 
    ​Details  DOI 
  • 2017 | Journal Article | 
    ​ ​No evidence for a bovine mastitis Escherichia coli pathotype​
    Leimbach, A.; Poehlein, A.; Vollmers, J.; Goerlich, D.; Daniel, R. & Dobrindt, U.​ (2017) 
    BMC Genomics, 18 art. 359​.​ DOI: https://doi.org/10.1186/s12864-017-3739-x 
    ​Details  DOI  PMID  PMC  WoS 
  • 2017 | Journal Article | 
    ​ ​Recent expansion and adaptive evolution of the carcinoembryonic antigen family in bats of the Yangochiroptera subgroup​
    Kammerer, R.; Mansfeld, M.; Hänske, J.; Mißbach, S.; He, X.; Köllner, B. & Mouchantat, S. et al.​ (2017) 
    BMC Genomics, 18(1).​ DOI: https://doi.org/10.1186/s12864-017-4106-7 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | 
    ​ ​Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds​
    Schaefer, R. J.; Schubert, M.; Bailey, E.; Bannasch, D. L.; Barrey, E.; Bar-Gal, G. K. & Brem, G. et al.​ (2017) 
    BMC Genomics, 18(1).​ DOI: https://doi.org/10.1186/s12864-017-3943-8 
    ​Details  DOI  PMID; PMID  PMC; PMC 
  • 2016 | Journal Article | 
    ​ ​Transcriptome responses to temperature, water availability and photoperiod are conserved among mature trees of two divergent Douglas-fir provenances from a coastal and an interior habitat (vol 17, 682, 2016)​
    Hess, M.; Wildhagen, H.; Junker, L. V. & Ensminger, I.​ (2016) 
    BMC Genomics, 17 art. 780​.​ DOI: https://doi.org/10.1186/s12864-016-3144-x 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | 
    ​ ​Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.) (vol 17, 730, 2016)​
    Lu, M.; Krutovsky, K. V. ; Nelson, C. D.; Koralewski, T. E.; Byram, T. D. & Loopstra, C. A.​ (2016) 
    BMC Genomics, 17 art. 869​.​ DOI: https://doi.org/10.1186/s12864-016-3220-2 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | 
    ​ ​Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.)​
    Lu, M.; Krutovsky, K. V. ; Nelson, C. D.; Koralewski, T. E.; Byram, T. D. & Loopstra, C. A.​ (2016) 
    BMC Genomics, 17 art. 730​.​ DOI: https://doi.org/10.1186/s12864-016-3081-8 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | 
    ​ ​Antagonism between Staphylococcus epidermidis and Propionibacterium acnes and its genomic basis​
    Christensen, G. J. M.; Scholz, C. F. P.; Enghild, J.; Rohde, H.; Kilian, M.; Thuermer, A. & Brzuszkiewicz, E. B. et al.​ (2016) 
    BMC Genomics, 17 art. 152​.​ DOI: https://doi.org/10.1186/s12864-016-2489-5 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | Research Paper | 
    ​ ​Immediate and long-term transcriptional response of hind muscle tissue to transient variation of incubation temperature in broilers​
    Naraballobh, W.; Trakooljul, N.; Murani, E.; Brunner, R.; Krischek, C.; Janisch, S. & Wicke, M. et al.​ (2016) 
    BMC Genomics, 17 art. 323​.​ DOI: https://doi.org/10.1186/s12864-016-2671-9 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | 
    ​ ​A robust (re-)annotation approach to generate unbiased mapping references for RNA-seq-based analyses of differential expression across closely related species​
    Torres-Oliva, M.; Almudi, I.; McGregor, A. P. & Posnien, N. ​ (2016) 
    BMC Genomics, 17 art. 392​.​ DOI: https://doi.org/10.1186/s12864-016-2646-x 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Journal Article | 
    ​ ​Transcriptome responses to temperature, water availability and photoperiod are conserved among mature trees of two divergent Douglas-fir provenances from a coastal and an interior habitat​
    Hess, M.; Wildhagen, H.; Junker, L. V. & Ensminger, I.​ (2016) 
    BMC Genomics, 17 art. 682​.​ DOI: https://doi.org/10.1186/s12864-016-3022-6 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article | 
    ​ ​Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken​
    Ni, G.; Strom, T.-M.; Pausch, H.; Reimer, C.; Preisinger, R.; Simianer, H. & Erbe, M.​ (2015) 
    BMC Genomics, 16 art. 824​.​ DOI: https://doi.org/10.1186/s12864-015-2059-2 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article | 
    ​ ​Large scale RNAi screen in Tribolium reveals novel target genes for pest control and the proteasome as prime target​
    Ulrich, J.; Dao, V. A.; Majumdar, U.; Schmitt-Engel, C.; Schwirz, J.; Schultheis, D. & Stroehlein, N. et al.​ (2015) 
    BMC Genomics, 16 art. 674​.​ DOI: https://doi.org/10.1186/s12864-015-1880-y 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article | 
    ​ ​RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior​
    Irmer, H.; Tarazona, S.; Sasse, C.; Olbermann, P.; Loeffler, J.; Krappmann, S. & Conesa, A. et al.​ (2015) 
    BMC Genomics, 16 art. 640​.​ DOI: https://doi.org/10.1186/s12864-015-1853-1 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article | 
    ​ ​SMRT sequencing of the Campylobacter coli BfR-CA-9557 genome sequence reveals unique methylation motifs​
    Zautner, A. E. ; Goldschmidt, A.-M.; Thürmer, A.; Schuldes, J.; Bader, O. ; Lugert, R.   & Groß, U.  et al.​ (2015) 
    BMC Genomics, 16 art. 1088​.​ DOI: https://doi.org/10.1186/s12864-015-2317-3 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article
    ​ ​Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40​
    Zischka, M.; Kuenne, C. T.; Blom, J.; Wobser, D.; Sakinc, T.; Schmidt-Hohagen, K. & Dabrowski, P. W. et al.​ (2015) 
    BMC Genomics, 16 art. 175​.​ DOI: https://doi.org/10.1186/s12864-015-1367-x 
    ​Details  DOI  PMID  PMC  WoS 
  • 2015 | Journal Article | 
    ​ ​Mitogenomic phylogeny of the common long-tailed macaque (Macaca fascicularis fascicularis)​
    Liedigk, R.; Kolleck, J.; Böker, K. O.; Meijaard, E.; Md-Zain, B. M.; Abdul-Latiff, M. A. B. & Ampeng, A. et al.​ (2015) 
    BMC Genomics, 16(1) art. 222​.​ DOI: https://doi.org/10.1186/s12864-015-1437-0 
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | 
    ​ ​Ion channels: their discovery, their function, and their role in disease​
    Neher, E. ​ (2014) 
    BMC Genomics, 15(S2).​ DOI: https://doi.org/10.1186/1471-2164-15-S2-O1 
    ​Details  DOI 
  • 2014 | Journal Article | 
    ​ ​Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions​
    Dippel, S.; Oberhofer, G.; Kahnt, J.; Gerischer, L.; Opitz, L.; Schachtner, J. & Stanke, M. et al.​ (2014) 
    BMC Genomics, 15 art. 1141​.​ DOI: https://doi.org/10.1186/1471-2164-15-1141 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​Predicting the functional repertoire of an organism from unassembled RNA-seq data​
    Landesfeind, M. & Meinicke, P. ​ (2014) 
    BMC Genomics, 15 art. 1003​.​ DOI: https://doi.org/10.1186/1471-2164-15-1003 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​Gene expression profiling of brains from bovine spongiform encephalopathy (BSE)-infected cynomolgus macaques​
    Barbisin, M.; Vanni, S.; Schmaedicke, A.-C.; Montag, J.; Motzkus, D.; Opitz, L. & Salinas-Riester, G. et al.​ (2014) 
    BMC Genomics, 15 art. 434​.​ DOI: https://doi.org/10.1186/1471-2164-15-434 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​Characterization of the pigmented shell-forming proteome of the common grove snail Cepaea nemoralis​
    Mann, K. & Jackson, D. J. ​ (2014) 
    BMC Genomics, 15 art. 249​.​ DOI: https://doi.org/10.1186/1471-2164-15-249 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​Dynamics of mRNA and polysomal abundance in early 3T3-L1 adipogenesis​
    Heyde, S. von der ; Fromm-Dornieden, C.; Salinas-Riester, G. ; Beißbarth, T.   & Baumgartner, B. G.​ (2014) 
    BMC Genomics, 15 art. 381​.​ DOI: https://doi.org/10.1186/1471-2164-15-381 
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​A genome-guided analysis of energy conservation in the thermophilic, cytochrome-free acetogenic bacterium Thermoanaerobacter kivui​
    Hess, V.; Poehlein, A. ; Weghoff, M. C.; Daniel, R.   & Müller, V.​ (2014) 
    BMC Genomics, 15 art. 1139​.​ DOI: https://doi.org/10.1186/1471-2164-15-1139 
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  • 2014 | Journal Article
    ​ ​The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown​
    Levasseur, A.; Lomascolo, A.; Chabrol, O.; Ruiz-Duenas, F. J.; Boukhris-Uzan, E.; Piumi, F. & Kuees, U.  et al.​ (2014) 
    BMC Genomics, 15(1) art. 486​.​ DOI: https://doi.org/10.1186/1471-2164-15-486 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Effect of the myostatin locus on muscle mass and intramuscular fat content in a cross between mouse lines selected for hypermuscularity​
    Kärst, S.; Strucken, E. M.; Schmitt, A. O. ; Weyrich, A.; de Villena, F. P. M.; Yang, H. & Brockmann, G. A.​ (2013) 
    BMC Genomics, 14(1).​ DOI: https://doi.org/10.1186/1471-2164-14-16 
    ​Details  DOI 
  • 2013 | Journal Article | 
    ​ ​RNAi phenotypes are influenced by the genetic background of the injected strain​
    Kitzmann, P.; Schwirz, J.; Schmitt-Engel, C. & Bucher, G.​ (2013) 
    BMC Genomics, 14 art. 5​.​ DOI: https://doi.org/10.1186/1471-2164-14-5 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​RNA-Seq of Bacillus licheniformis: active regulatory RNA features expressed within a productive fermentation​
    Wiegand, S.; Dietrich, S.; Hertel, R.; Bongaerts, J.; Evers, S.; Volland, S. & Daniel, R. et al.​ (2013) 
    BMC Genomics, 14 art. 667​.​ DOI: https://doi.org/10.1186/1471-2164-14-667 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Comparative genomics reveals distinct host-interacting traits of three major human-associated propionibacteria​
    Mak, T. N.; Schmid, M.; Brzuszkiewicz, E. B.; Zeng, G.; Meyer, R.; Sfanos, K. S. & Brinkmann, V. et al.​ (2013) 
    BMC Genomics, 14 art. 640​.​ DOI: https://doi.org/10.1186/1471-2164-14-640 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome​
    Kuenne, C. T.; Billion, A.; Abu Mraheil, M.; Strittmatter, A. W.; Daniel, R.; Goesmann, A. & Barbuddhe, S. et al.​ (2013) 
    BMC Genomics, 14 art. 47​.​ DOI: https://doi.org/10.1186/1471-2164-14-47 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Development of a high density 600K SNP genotyping array for chicken​
    Kranis, A.; Gheyas, A. A.; Boschiero, C.; Turner, F.; Yu, L. E.; Smith, S. & Talbot, R. et al.​ (2013) 
    BMC Genomics, 14 art. 59​.​ DOI: https://doi.org/10.1186/1471-2164-14-59 
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans​
    Poehlein, A.; Daniel, R.; Schink, B. & Simeonova, D. D.​ (2013) 
    BMC Genomics, 14 art. 753​.​ DOI: https://doi.org/10.1186/1471-2164-14-753 
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article | 
    ​ ​Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression​
    Li, X.; Zhu, J.; Hu, F.; Ge, S.; Ye, M.; Xiang, H. & Zhang, G. et al.​ (2012) 
    BMC Genomics, 13(1) art. 300​.​ DOI: https://doi.org/10.1186/1471-2164-13-300 
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​A genome-wide survey for prion-regulated miRNAs associated with cholesterol homeostasis​
    Montag, J.; Brameier, M.; Schmädicke, A.-C.; Gilch, S.; Schätzl, H. M. & Motzkus, D.​ (2012) 
    BMC Genomics, 13(1) art. 486​.​ DOI: https://doi.org/10.1186/1471-2164-13-486 
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient​
    Schroder, J.; Maus, I.; Meyer, K.; Wordemann, S.; Blom, J.; Jaenicke, S. & Schneider, J. et al.​ (2012) 
    BMC Genomics, 13(1) art. 141​.​ DOI: https://doi.org/10.1186/1471-2164-13-141 
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Deciphering neo-sex and B chromosome evolution by the draft genome of Drosophila albomicans​
    Zhou, Q.; Zhu, H.-m.; Huang, Q.-f.; Xuan, Z.-l.; Zhang, G.-j.; Zhao, L. & Ding, Y. et al.​ (2012) 
    BMC Genomics, 13(1) art. 109​.​ DOI: https://doi.org/10.1186/1471-2164-13-109 
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp Rue61a​
    Niewerth, H.; Schuldes, J.; Parschat, K.; Kiefer, P.; Vorholt, J. A.; Daniel, R. & Fetzner, S.​ (2012) 
    BMC Genomics, 13 art. 534​.​ DOI: https://doi.org/10.1186/1471-2164-13-534 
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article | 
    ​ ​Genome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeum​
    Oehler, D.; Poehlein, A.; Leimbach, A.; Mueller, N.; Daniel, R.; Gottschalk, G. & Schink, B.​ (2012) 
    BMC Genomics, 13 art. 723​.​ DOI: https://doi.org/10.1186/1471-2164-13-723 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Venom gland transcriptomes of two Elapid snakes (Bungarus multicinctus and Naja atra) and evolution of toxin genes​
    Jiang, Y.; Li, Y.; Lee, W.; Xu, X.; Zhang, Y.; Zhao, R. & Zhang, Y. et al.​ (2011) 
    BMC Genomics, 12(1) art. 1​.​ DOI: https://doi.org/10.1186/1471-2164-12-1 
    ​Details  DOI 
  • 2011 | Journal Article | 
    ​ ​Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle​
    Qanbari, S.; Gianola, D. S.; Hayes, B.; Schenkel, F.; Miller, S.; Moore, S. & Thaller, G. et al.​ (2011) 
    BMC Genomics, 12 art. 318​.​ DOI: https://doi.org/10.1186/1471-2164-12-318 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01​
    Gounder, K.; Brzuszkiewicz, E. B.; Liesegang, H.; Wollherr, A.; Daniel, R.; Gottschalk, G. & Reva, O. et al.​ (2011) 
    BMC Genomics, 12 art. 577​.​ DOI: https://doi.org/10.1186/1471-2164-12-577 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis​
    Kalhoefer, D.; Thole, S.; Voget, S.; Lehmann, R.; Liesegang, H.; Wollher, A. & Daniel, R. et al.​ (2011) 
    BMC Genomics, 12 art. 324​.​ DOI: https://doi.org/10.1186/1471-2164-12-324 
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article | 
    ​ ​Tracking chromosomal positions of oligomers - a case study with Illumina's BovineSNP50 beadchip​
    Schmitt, A. O. ; Bortfeldt, R. H. & Brockmann, G. A.​ (2010) 
    BMC Genomics, 11(1).​ DOI: https://doi.org/10.1186/1471-2164-11-80 
    ​Details  DOI 
  • 2010 | Journal Article | 
    ​ ​Prednisolone-induced differential gene expression in mouse liver carrying wild type or a dimerization-defective glucocorticoid receptor​
    Frijters, R.; Fleuren, W.; Toonen, E. J. M.; Tuckermann, J. P.; Reichardt, H. M.; van der Maaden, H. & van Elsas, A. et al.​ (2010) 
    BMC Genomics, 11 art. 359​.​ DOI: https://doi.org/10.1186/1471-2164-11-359 
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article | 
    ​ ​Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8​
    Farnbacher, M.; Jahns, T.; Willrodt, D.; Daniel, R.; Haas, R.; Goesmann, A. & Kurtz, S. et al.​ (2010) 
    BMC Genomics, 11 art. 335​.​ DOI: https://doi.org/10.1186/1471-2164-11-335 
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article
    ​ ​A fast and cost-effective approach to develop and map EST-SSR markers: Oak as a case study​
    Durand, J.; Bodenes, C.; Chancerel, E.; Frigerio, J.-M.; Vendramin, G. G.; Sebastiani, F. & Buonamici, A. et al.​ (2010) 
    BMC Genomics, 11(1) art. 570​.​ DOI: https://doi.org/10.1186/1471-2164-11-570 
    ​Details  DOI  PMID  PMC  WoS 
  • 2009 | Journal Article | 
    ​ ​Reconstructing the phylogeny of 21 completely sequenced arthropod species based on their motor proteins​
    Odronitz, F.; Becker, S. & Kollmar, M.​ (2009) 
    BMC Genomics, 10 art. 173​.​ DOI: https://doi.org/10.1186/1471-2164-10-173 
    ​Details  DOI 
  • 2009 | Journal Article | 
    ​ ​The effect of sequencing errors on metagenomic gene prediction​
    Hoff, K. J.​ (2009) 
    BMC Genomics, 10 art. 520​.​ DOI: https://doi.org/10.1186/1471-2164-10-520 
    ​Details  DOI  PMID  PMC  WoS 
  • 2009 | Review | 
    ​ ​UFO: a web server for ultra-fast functional profiling of whole genome protein sequences​
    Meinicke, P. ​ (2009)
    BMC Genomics, 10​.​
    Biomed Central Ltd. DOI: https://doi.org/10.1186/1471-2164-10-409 
    ​Details  DOI  PMID  PMC  WoS 
  • 2008 | Journal Article | 
    ​ ​Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.)​
    Laurentin, H.; Ratzinger, A. & Karlovsky, P. ​ (2008) 
    BMC genomics, 9(250) pp. 1​-11​.​
    ​Details 
  • 2008 | Journal Article | 
    ​ ​Improved coverage of cDNA-AFLP by sequential digestion of immobilized cDNA​
    Weiberg, A.; Poehler, D.; Morgenstern, B.   & Karlovsky, P. ​ (2008) 
    BMC Genomics, 9 art. 480​.​ DOI: https://doi.org/10.1186/1471-2164-9-480 
    ​Details  DOI  PMID  PMC  WoS 
  • 2008 | Journal Article | 
    ​ ​A fragmented metazoan organellar genome: the two mitochondrial chromosomes of Hydra magnipapillata​
    Voigt, O.; Erpenbeck, D. & Woerheide, G.​ (2008) 
    BMC Genomics, 9 art. 350​.​ DOI: https://doi.org/10.1186/1471-2164-9-350 
    ​Details  DOI  PMID  PMC  WoS 
  • 2008 | Journal Article | 
    ​ ​WebScipio: an online tool for the determination of gene structures using protein sequences.​
    Odronitz, F.; Pillmann, H.; Keller, O.; Waack, S. & Kollmar, M.​ (2008) 
    BMC genomics, 9 pp. 422​-422​.​ DOI: https://doi.org/10.1186/1471-2164-9-422 
    ​Details  DOI  PMID  PMC 
  • 2007 | Journal Article | 
    ​ ​Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate​
    Datson, N. A.; Morsink, M. C.; Atanasova, S.; Armstrong, V. W.; Zischler, H.; Schlumbohm, C. & Dutilh, B. E. et al.​ (2007) 
    BMC genomics, 8(190) pp. 1​-9​.​
    ​Details 
  • 2007 | Journal Article | 
    ​ ​diArk – a resource for eukaryotic genome research​
    Odronitz, F.; Hellkamp, M. & Kollmar, M.​ (2007) 
    BMC Genomics, 8(1) pp. 103​.​ DOI: https://doi.org/10.1186/1471-2164-8-103 
    ​Details  DOI 
  • 2007 | Journal Article | 
    ​ ​An analysis of expression patterns of genes encoding proteins with catalytic activities​
    Cankaya, M.; Hernandez, A.; Ciftci, M.; Beydemir, S.; Ozdemir, H.; Budak, H. & Gulcin, I. et al.​ (2007) 
    BMC Genomics, 8(1) pp. 232​.​ DOI: https://doi.org/10.1186/1471-2164-8-232 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​Thirteen is enough: the myosins of Dictyostelium discoideum and their light chains​
    Kollmar, M.​ (2006) 
    BMC Genomics, 7 art. 183​.​ DOI: https://doi.org/10.1186/1471-2164-7-183 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​Pfarao: a web application for protein family analysis customized for cytoskeletal and motor proteins (CyMoBase)​
    Odronitz, F. & Kollmar, M.​ (2006) 
    BMC Genomics, 7 art. 300​.​ DOI: https://doi.org/10.1186/1471-2164-7-300 
    ​Details  DOI 
  • 2006 | Journal Article | 
    ​ ​Systematic interpretation of microarray data using experiment annotations​
    Fellenberg, K.; Busold, C. H.; Witt, O.; Bauer, A.; Beckmann, B.; Hauser, N. C. & Frohme, M. et al.​ (2006) 
    BMC Genomics, 7 art. 319​.​ DOI: https://doi.org/10.1186/1471-2164-7-319 
    ​Details  DOI  PMID  PMC  WoS 
  • 2005 | Journal Article | 
    ​ ​Conversion of cDNA differential display results (DDRT-PCR) into quantitative transcription profiles​
    Venkatesh, B.; Hettwer, U.; Koopmann, B.   & Karlovsky, P. ​ (2005) 
    BMC Genomics, 6 art. 51​.​ DOI: https://doi.org/10.1186/1471-2164-6-51 
    ​Details  DOI  PMID  PMC  WoS 
  • 2003 | Journal Article | 
    ​ ​Identification and phylogenetic analysis of Dictyostelium discoideum kinesin proteins.​
    Kollmar, M. & Glöckner, G.​ (2003) 
    BMC genomics, 4(1) pp. 47​-47​.​ DOI: https://doi.org/10.1186/1471-2164-4-47 
    ​Details  DOI  PMID  PMC 
  • 2003 | Journal Article | 
    ​ ​A high resolution physical and RH map of pig chromosome 6q1.2 and comparative analysis with human chromosome 19q13.1​
    Martins-Wess, F.; Milan, D.; Drogemuller, C.; Voss-Nemitz, R.; Brenig, B.; Robic, A. & Yerle, M. et al.​ (2003) 
    BMC Genomics, 4 art. 20​.​ DOI: https://doi.org/10.1186/1471-2164-4-20 
    ​Details  DOI  PMID  PMC  WoS 

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