Prof. Dr. Silvio O. Rizzoli

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  • 2023 | Journal Article
    ​ ​Trafficking proteins show limited differences in mobility across different postsynaptic spines​
    Mougios, N.; Opazo, F. ; Rizzoli, S. O.   & Reshetniak, S.​ (2023) 
    iScience, 26(2) art. 105971​.​ DOI: https://doi.org/10.1016/j.isci.2023.105971 
    ​Details  DOI  PMID  PMC 
  • 2023 | Preprint
    ​ ​Age-dependent structural reorganization of utricular ribbon synapses​
    Michanski, S.; Henneck, T.; Mukhopadhyay, M.; Steyer, A. M.; Gonzalez, P. A.; Grewe, K.& Ilgen, P. et al.​ (2023). DOI: https://doi.org/10.1101/2022.12.19.521049 
    ​Details  DOI 
  • 2022 | Journal Article | Overview | 
    ​ ​Extracellular Matrix Recycling as a Novel Plasticity Mechanism With a Potential Role in Disease​
    Dankovich, T. M. & Rizzoli, S. O. ​ (2022) 
    Frontiers in Cellular Neuroscience, 16.​ DOI: https://doi.org/10.3389/fncel.2022.854897 
    ​Details  DOI  PMID  PMC 
  • 2022 | Journal Article | Overview | 
    ​ ​The Synaptic Extracellular Matrix: Long-Lived, Stable, and Still Remarkably Dynamic​
    Dankovich, T. M. & Rizzoli, S. O. ​ (2022) 
    Frontiers in Synaptic Neuroscience, 14.​ DOI: https://doi.org/10.3389/fnsyn.2022.854956 
    ​Details  DOI  PMID  PMC 
  • 2022 | Preprint
    ​ ​Expansion microscopy at one nanometer resolution​
    Shaib, A. H.; Chouaib, A. A.; Imani, V.; Chowdhury, R.; Georgiev, S. V.; Mougios, N.& Monga, M. et al.​ (2022). DOI: https://doi.org/10.1101/2022.08.03.502284 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​An iodine-containing probe as a tool for molecular detection in secondary ion mass spectrometry​
    Kabatas Glowacki, S.; Agüi-Gonzalez, P. ; Sograte-Idrissi, S.; Jähne, S. ; Opazo Davila, L. F. ; Phan, N. T. N.   & Rizzoli, S. O. ​ (2022) 
    Chemical Communications,.​ DOI: https://doi.org/10.1039/D2CC02290G 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​IGF-1 receptor regulates upward firing rate homeostasis via the mitochondrial calcium uniporter​
    Katsenelson, M.; Shapira, I.; Abbas, E.; Jevdokimenko, K.; Styr, B.; Ruggiero, A. & Aïd, S. et al.​ (2022) 
    Proceedings of the National Academy of Sciences, 119(33) art. e2121040119​.​ DOI: https://doi.org/10.1073/pnas.2121040119 
    ​Details  DOI  PMID  PMC 
  • 2022 | Journal Article | Research Paper | 
    ​ ​A Reliable Approach for Revealing Molecular Targets in Secondary Ion Mass Spectrometry​
    Li, F.; Fornasiero, E. F.; Dankovich, T. M.; Kluever, V. & Rizzoli, S. O. ​ (2022) 
    International Journal of Molecular Sciences, 23(9) pp. 4615​.​ DOI: https://doi.org/10.3390/ijms23094615 
    ​Details  DOI  PMID  PMC 
  • 2021 | Preprint
    ​ ​Super-resolution microscopy informs on the molecular architecture of alpha-synuclein inclusions in model systems and in the human brain​
    Weish, P.; Lázaro, D. F.; Palmares, L.; Santos, P. I.; Stadelmann, C. ; Höglinger, G. U.& Rizzoli, S. O.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.04.25.441304 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​IGF1 Receptor Regulates Upward Firing Rate Homeostasis via the Mitochondrial Calcium Uniporter​
    Katsenelson, M.; Shapira, I.; Abbas, E.; Styr, B.; Aïd, S.; Holzenberger, M.& Rizzoli, S.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.12.11.469196 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper
    ​ ​A large-scale nanoscopy and biochemistry analysis of postsynaptic dendritic spines​
    Helm, M. S.; Dankovich, T. M.; Mandad, S. ; Rammner, B.; Jähne, S. ; Salimi, V. & Koerbs, C. et al.​ (2021) 
    Nature Neuroscience, 24(8) pp. 1151​-1162​.​ DOI: https://doi.org/10.1038/s41593-021-00874-w 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Presynaptic activity and protein turnover are correlated at the single-synapse level​
    Jähne, S. ; Mikulasch, F.; Heuer, H. G.; Truckenbrodt, S.; Agüi-Gonzalez, P. ; Grewe, K. & Vogts, A. et al.​ (2021) 
    Cell Reports, 34(11) pp. 108841​.​ DOI: https://doi.org/10.1016/j.celrep.2021.108841 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Protein Phosphorylation in Depolarized Synaptosomes: Dissecting Primary Effects of Calcium from Synaptic Vesicle Cycling​
    Silbern, I.; Pan, K.-T.; Fiosins, M.; Bonn, S. ; Rizzoli, S. O. ; Fornasiero, E. F.   & Urlaub, H.  et al.​ (2021) 
    Molecular & Cellular Proteomics, 20 pp. 100061​.​ DOI: https://doi.org/10.1016/j.mcpro.2021.100061 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​A microRNA signature that correlates with cognition and is a target against cognitive decline​
    Islam, M. R.; Kaurani, L.; Berulava, T.; Heilbronner, U.; Budde, M.; Centeno, T. P. & Elerdashvili, V. et al.​ (2021) 
    EMBO Molecular Medicine, 13(11).​ DOI: https://doi.org/10.15252/emmm.202013659 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R​
    Dankovich, T. M.; Kaushik, R.; Olsthoorn, L. H. M.; Petersen, G. C.; Giro, P. E.; Kluever, V. & Agüi-Gonzalez, P.  et al.​ (2021) 
    Nature Communications, 12(1) art. 7129​.​ DOI: https://doi.org/10.1038/s41467-021-27462-7 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Overview | 
    ​ ​The vesicle cluster as a major organizer of synaptic composition in the short-term and long-term​
    Reshetniak, S. & Rizzoli, S. O. ​ (2021) 
    Current Opinion in Cell Biology, 71 pp. 63​-68​.​ DOI: https://doi.org/10.1016/j.ceb.2021.02.007 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Overview | 
    ​ ​Challenges facing quantitative large-scale optical super-resolution, and some simple solutions​
    Dankovich, T. M. & Rizzoli, S. O. ​ (2021) 
    iScience, 24(3) pp. 102134​.​ DOI: https://doi.org/10.1016/j.isci.2021.102134 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper
    ​ ​The mRNA-Binding Protein RBM3 Regulates Activity Patterns and Local Synaptic Translation in Cultured Hippocampal Neurons​
    Sertel, S. M.; von Elling-Tammen, M. S. & Rizzoli, S. O. ​ (2021) 
    The Journal of Neuroscience, 41(6) pp. 1157​-1173​.​ DOI: https://doi.org/10.1523/JNEUROSCI.0921-20.2020 
    ​Details  DOI  PMID  PMC 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Monitoring mitochondrial translation in living cells​
    Yousefi, R.; Fornasiero, E. F ; Cyganek, L. ; Montoya, J.; Jakobs, S. ; Rizzoli, S. O   & Rehling, P.  et al.​ (2021) 
    EMBO reports, 22(4).​ DOI: https://doi.org/10.15252/embr.202051635 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​A minimalist model to measure interactions between proteins and synaptic vesicles​
    Perego, E.; Reshetniak, S.; Lorenz, C.; Hoffmann, C.; Milovanović, D. ; Rizzoli, S. O.   & Köster, S. ​ (2020) 
    Scientific Reports, 10(1).​ DOI: https://doi.org/10.1038/s41598-020-77887-1 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​A comparative analysis of the mobility of 45 proteins in the synaptic bouton​
    Reshetniak, S.; Ußling, J.; Perego, E.; Rammner, B.; Schikorski, T.; Fornasiero, E. F.   & Truckenbrodt, S. et al.​ (2020) 
    The EMBO Journal, 39(16).​ DOI: https://doi.org/10.15252/embj.2020104596 
    ​Details  DOI  PMID  PMC 
  • 2020 | Preprint
    ​ ​White matter integrity requires continuous myelin synthesis at the inner tongue​
    Meschkat, M.; Steyer, A. M.; Weil, M.-T.; Kusch, K.; Jahn, O.; Piepkorn, L.& Agüi-Gonzalez, P. et al.​ (2020). DOI: https://doi.org/10.1101/2020.09.02.279612 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Local translation in synaptic mitochondria influences synaptic transmission​
    Yousefi, R.; Fornasiero, E. F.; Cyganek, L.; Jakobs, S. ; Rizzoli, S. O. ; Rehling, P.  & Pacheu-Grau, D.​ (2020). DOI: https://doi.org/10.1101/2020.07.22.215194 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R​
    Dankovich, T. M.; Kaushik, R.; Petersen, G. C.; Giro, P. E.; Hadi, H. A.; Bao, G.& Beuermann, S. et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.11.377515 
    ​Details  DOI 
  • 2020 | Journal Article | Erratum | 
    ​ ​Correction: Circumvention of common labelling artefacts using secondary nanobodies​
    Sograte-Idrissi, S.; Schlichthaerle, T.; Duque-Afonso, C. J. ; Alevra, M.; Strauss, S.; Moser, T.   & Jungmann, R. et al.​ (2020) 
    Nanoscale, 12(48) pp. 24543​-24543​.​ DOI: https://doi.org/10.1039/d0nr90279a 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Quantitative Synaptic Biology: A Perspective on Techniques, Numbers and Expectations​
    Reshetniak, S.; Fernández Busnadiego, R. ; Müller, M. ; Rizzoli, S. O.   & Tetzlaff, C.​ (2020) 
    International Journal of Molecular Sciences, 21(19) pp. 7298​.​ DOI: https://doi.org/10.3390/ijms21197298 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Overview | 
    ​ ​Novel Secondary Ion Mass Spectrometry Methods for the Examination of Metabolic Effects at the Cellular and Subcellular Levels​
    Bonnin, E. A. & Rizzoli, S. O. ​ (2020) 
    Frontiers in Behavioral Neuroscience, 14.​ DOI: https://doi.org/10.3389/fnbeh.2020.00124 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Ultrastructural Correlates of Presynaptic Functional Heterogeneity in Hippocampal Synapses​
    Maus, L.; Lee, C.; Altas, B.; Sertel, S. M.; Weyand, K.; Rizzoli, S. O.   & Rhee, J.  et al.​ (2020) 
    Cell Reports, 30(11) pp. 3632​-3643.e8​.​ DOI: https://doi.org/10.1016/j.celrep.2020.02.083 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​A nanobody-based fluorescent reporter reveals human α-synuclein in the cell cytosol​
    Gerdes, C.; Waal, N.; Offner, T.; Fornasiero, E. F. ; Wender, N.; Verbarg, H. & Manzini, I. et al.​ (2020) 
    Nature Communications, 11(1).​ DOI: https://doi.org/10.1038/s41467-020-16575-0 
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Circumvention of common labelling artefacts using secondary nanobodies​
    Sograte-Idrissi, S.; Schlichthaerle, T.; Duque-Afonso, C. J. ; Alevra, M.; Strauss, S.; Moser, T.   & Jungmann, R. et al.​ (2020) 
    Nanoscale, 12(18) pp. 10226​-10239​.​ DOI: https://doi.org/10.1039/d0nr00227e 
    ​Details  DOI  PMID  PMC 
  • 2019 | Preprint
    ​ ​Circumvention of common labeling artifacts using secondary nanobodies​
    Sograte-Idrissi, S.; Schlichthaerle, T.; Duque-Afonso, C. J. ; Alevra, M.; Strauss, S.; Moser, T.  & Jungmann, R. et al.​ (2019). DOI: https://doi.org/10.1101/818351 
    ​Details  DOI 
  • 2019 | Journal Article | Research Paper
    ​ ​A mass spectrometry workflow for measuring protein turnover rates in vivo​
    Alevra, M.; Mandad, S. ; Ischebeck, T. ; Urlaub, H. ; Rizzoli, S. O.   & Fornasiero, E. F. ​ (2019) 
    Nature Protocols, 14(12) pp. 3333​-3365​.​ DOI: https://doi.org/10.1038/s41596-019-0222-y 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | Research Paper | 
    ​ ​The long noncoding RNA neuroLNC regulates presynaptic activity by interacting with the neurodegeneration-associated protein TDP-43​
    Keihani, S.; Kluever, V.; Mandad, S. ; Bansal, V.; Rahman, R. ; Fritsch, E. & Gomes, L. C. et al.​ (2019) 
    Science Advances, 5(12) pp. eaay2670​.​ DOI: https://doi.org/10.1126/sciadv.aay2670 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper | 
    ​ ​The codon sequences predict protein lifetimes and other parameters of the protein life cycle in the mouse brain​
    Mandad, S.; Rahman, R.-U.; Centeno, T. P.; Vidal, R. O.; Wildhagen, H.; Rammner, B. & Keihani, S. et al.​ (2018) 
    Scientific Reports, 8(1) art. 16913​.​ DOI: https://doi.org/10.1038/s41598-018-35277-8 
    ​Details  DOI  PMID  PMC 

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