Prof. Dr. Rolf Daniel

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  • 2023 | Journal Article | 
    ​ ​Friedrich, Ines, Hannes Neubauer, Alisa Kuritsyn, Bernhard Bodenberger, Faina Tskhay, Sara Hartmann, Anja Poehlein et al. "Brevundimonas and Serratia as host systems for assessing associated environmental viromes and phage diversity by complementary approaches​." ​Frontiers in Microbiology ​14 (2023): . ​https://doi.org/10.3389/fmicb.2023.1095850.
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  • 2023 | Journal Article | 
    ​ ​Iddris, Najeeb Al-Amin, Greta Formaglio, Carola Paul, Volker Christian von Groß, Guantao Chen, Andres Angulo-Rubiano, Dirk Berkelmann et al. "Mechanical weeding enhances ecosystem multifunctionality and profit in industrial oil palm​." ​Nature Sustainability (2023): . ​https://doi.org/10.1038/s41893-023-01076-x.
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  • 2023 | Journal Article | 
    ​ ​Hollensteiner, Jacqueline, Dominik Schneider, Anja Poehlein, Axel Himmelbach, and Rolf Daniel. "Metagenome-assembled genomes from particle-associated microbial communities in the mesopelagic zone of the Pacific Ocean​." ​Microbiology Resource Announcements (2023): ​e00614-23​. ​https://doi.org/10.1128/MRA.00614-23.
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  • 2023 | Journal Article | 
    ​ ​Hollensteiner, Jacqueline, Dominik Schneider, Anja Poehlein, Thorsten Brinkhoff, and Rolf Daniel. "Pan-genome analysis of six Paracoccus type strain genomes reveal lifestyle traits​." ​PLoS One ​18, no. 12 (2023): ​e0287947​. ​https://doi.org/10.1371/journal.pone.0287947.
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  • 2022 | Journal Article | 
    ​ ​Lewkowski, Oleg, Anja Poehlein, Rolf Daniel, and Silvio Erler. "In the battle of the disease: a transcriptomic analysis of European foulbrood-diseased larvae of the Western honey bee (Apis mellifera)​." ​BMC Genomics ​23, no. 1 (2022): ​837​. ​https://doi.org/10.1186/s12864-022-09075-6.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Lu, Mingji, Dominik Schneider, and Rolf Daniel. "Metagenomic Screening for Lipolytic Genes Reveals an Ecology-Clustered Distribution Pattern​." ​Frontiers in Microbiology ​13 (2022): . ​https://doi.org/10.3389/fmicb.2022.851969.
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  • 2022 | Journal Article | 
    ​ ​Breisch, Jennifer, Clemens Schumm, Anja Poehlein, Rolf Daniel, and Beate Averhoff. "The carnitine degradation pathway of Acinetobacter baumannii and its role in virulence​." ​Environmental Microbiology ​24, no. 9 (2022): ​1462-2920.16075​. ​https://doi.org/10.1111/1462-2920.16075.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Werner, Katharina A., Anja Poehlein, Dominik Schneider, Khaliel El-Said, Michael Wöhrmann, Isabel Linkert, Tobias Hübner et al. "Thermophilic Composting of Human Feces: Development of Bacterial Community Composition and Antimicrobial Resistance Gene Pool​." ​Frontiers in Microbiology ​13 (2022): . ​https://doi.org/10.3389/fmicb.2022.824834.
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  • 2022 | Journal Article | Research Paper
    ​ ​Rudolph, Katja, Dominik Schneider, Claudia Fichtel, Rolf Daniel, Michael Heistermann, and Peter M. Kappeler. "Drivers of gut microbiome variation within and between groups of a wild Malagasy primate​." ​Microbiome ​10, no. 1 (2022): ​28​. ​https://doi.org/10.1186/s40168-021-01223-6.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Ryadin, Aisjah R., Dennis Janz, Dominik Schneider, Aiyen Tjoa, Bambang Irawan, Rolf Daniel, and Andrea Polle. "Early Effects of Fertilizer and Herbicide Reduction on Root-Associated Biota in Oil Palm Plantations​." ​Agronomy ​12, no. 1 (2022): ​199​. ​https://doi.org/10.3390/agronomy12010199.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Chacón, Florencia Isabel, Pedro Eugenio Sineli, Flavia Ivana Mansilla, Martina Maria Pereyra, Mariana Andrea Diaz, Sabrina Inés Volentini, Anja Poehlein, Friedhelm Meinhardt, Rolf Daniel, and Julián Rafael Dib. "Native Cultivable Bacteria from the Blueberry Microbiome as Novel Potential Biocontrol Agents​." ​Microorganisms ​10, no. 5 (2022): ​969​. ​https://doi.org/10.3390/microorganisms10050969.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Murillo, Tatiana, Dominik Schneider, Claudia Fichtel, and Rolf Daniel. "Dietary shifts and social interactions drive temporal fluctuations of the gut microbiome from wild redfronted lemurs​." ​ISME Communications ​2, no. 1 (2022): . ​https://doi.org/10.1038/s43705-021-00086-0.
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  • 2022 | Journal Article
    ​ ​Schoch, Teresa, Franziska Höfele, Hannah Odeh, Lisa-Maria Winter, Sophia Stöferle, Michael Karl, Frank Bengelsdorf, Anja Poehlein, Rolf Daniel, and Peter Dürre. "Reclassification of Clostridium aurantibutyricum Hellinger 1944 and Clostridium roseum (ex McCoy and McClung 1935) Cato et al. 1988​." ​International Journal of Systematic and Evolutionary Microbiology ​72, no. 10 (2022): . ​https://doi.org/10.1099/ijsem.0.005589.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​von Hoyningen-Huene, Avril Jean Elisabeth, Dominik Schneider, Dario Fussmann, Andreas Reimer, Gernot Arp, and Rolf Daniel. "DNA- and RNA-based bacterial communities and geochemical zonation under changing sediment porewater dynamics on the Aldabra Atoll​." ​Scientific Reports ​12, no. 1 (2022): ​4257​. ​https://doi.org/10.1038/s41598-022-07980-0.
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  • 2022 | Journal Article | Research Paper
    ​ ​Fussmann, Dario, Avril J. E. von Hoyningen-Huene, Andreas Reimer, Dominik Schneider, Volker Karius, Sylvia Riechelmann, Chelsea Pederson, Peter K. Swart, Rolf Daniel, and Gernot Arp. "Decoupling of Pore Water Chemistry, Bacterial Community Profiles, and Carbonate Mud Diagenesis in a Land-Locked Pool on Aldabra (Seychelles, Indian Ocean)​." ​Geomicrobiology Journal (2022): ​1​-19​. ​https://doi.org/10.1080/01490451.2022.2070689.
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Rivera Pérez, Carmen Alicia, Dennis Janz, Dominik Schneider, Rolf Daniel, and Andrea Polle. "Transcriptional Landscape of Ectomycorrhizal Fungi and Their Host Provides Insight into N Uptake from Forest Soil​." ​mSystems ​7, no. 1 (2022): . ​https://doi.org/10.1128/mSystems.00957-21.
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  • 2022 | Preprint | 
    ​ ​Montoya-Sánchez, Vannesa, Holger Kreft, Isabelle Arimond, Johannes Ballauff, Dirk Berkelmann, Fabian Brambach, Rolf Daniel et al​. "Landscape heterogeneity and soil biota are central to multi-taxa diversity for landscape restoration​." ​Preprint, submitted ​​2022. https://doi.org/10.1101/2022.10.31.514517.
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  • 2022 | Journal Article | 
    ​ ​Eze, Michael O., Volker Thiel, Grant C. Hose, Simon C. George, and Rolf Daniel. "Bacteria-plant interactions synergistically enhance biodegradation of diesel fuel hydrocarbons​." ​Communications Earth & Environment ​3, no. 1 (2022): . ​https://doi.org/10.1038/s43247-022-00526-2.
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  • 2021 | Journal Article | 
    ​ ​Friedrich, Ines, Anna Klassen, Hannes Neubauer, Dominik Schneider, Robert Hertel, and Rolf Daniel. "Living in a Puddle of Mud: Isolation and Characterization of Two Novel Caulobacteraceae Strains Brevundimonas pondensis sp. nov. and Brevundimonas goettingensis sp. nov.​." ​Applied Microbiology ​1, no. 1 (2021): . ​https://doi.org/10.3390/applmicrobiol1010005.
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  • 2021 | Journal Article
    ​ ​Rosenbaum, Florian P., Anja Poehlein, Richard Egelkamp, Rolf Daniel, Sönke Harder, Hartmut Schlüter, and Marie Charlotte Schoelmerich. "Lactate metabolism in strictly anaerobic microorganisms with a soluble NAD + ‐dependent l ‐lactate dehydrogenase​." ​Environmental Microbiology (2021): ​1462-2920.15657​. ​https://doi.org/10.1111/1462-2920.15657.
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  • 2021 | Journal Article
    ​ ​Richts, Björn, Sabine Lentes, Anja Poehlein, Rolf Daniel, and Fabian M. Commichau. "A Bacillus subtilis   Δ pdxT mutant suppresses vitamin B6 limitation by acquiring mutations enhancing pdxS gene dosage and ammonium assimilation​." ​Environmental Microbiology Reports ​13, no. 2 (2021): ​218​-233​. ​https://doi.org/10.1111/1758-2229.12936.
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  • 2021 | Journal Article | Research Paper | 
    ​ ​Krüger, Larissa, Christina Herzberg, Hermann Rath, Tiago Pedreira, Till Ischebeck, Anja Poehlein, Jan Gundlach et al. "Essentiality of c-di-AMP in Bacillus subtilis: Bypassing mutations converge in potassium and glutamate homeostasis​." ​PLoS Genetics ​17, no. 1 (2021): ​e1009092​. ​https://doi.org/10.1371/journal.pgen.1009092.
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  • 2021 | Journal Article | Research Paper | 
    ​ ​Lu, Mingji, and Rolf Daniel. "A Novel Carboxylesterase Derived from a Compost Metagenome Exhibiting High Stability and Activity towards High Salinity​." ​Genes ​12, no. 1 (2021): ​122​. ​https://doi.org/10.3390/genes12010122.
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  • 2021 | Journal Article | Research Paper | 
    ​ ​Friedrich, Ines, Bernhard Bodenberger, Hannes Neubauer, Robert Hertel, and Rolf Daniel. "Down in the pond: Isolation and characterization of a new Serratia marcescens strain (LVF3) from the surface water near frog’s lettuce (Groenlandia densa)​." ​PLoS One ​16, no. 11 (2021): ​e0259673​. ​https://doi.org/10.1371/journal.pone.0259673.
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  • 2021 | Journal Article | Research Paper | 
    ​ ​von Hoyningen-Huene, Avril J. E., Tabea J. Schlotthauer, Dominik Schneider, Anja Poehlein, and Rolf Daniel. "Pontibacillus sp. ALD_SL1 and Psychroflexus sp. ALD_RP9, two novel moderately halophilic bacteria isolated from sediment and water from the Aldabra Atoll, Seychelles​." ​PLoS One ​16, no. 8 (2021): ​e0256639​. ​https://doi.org/10.1371/journal.pone.0256639.
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  • 2020 | Journal Article | Erratum
    ​ ​Wübbeler, Jan Hendrik, Fred Bernd Oppermann-Sanio, Andrea Ockenfels, Annika Röttig, Alena Osthaar-Ebker, Susanne Verbarg, Anja Poehlein et al. "Corrigendum: Sphingomonas jeddahensis sp. nov., isolated from Saudi Arabian desert soil​." ​International Journal of Systematic and Evolutionary Microbiology ​70, no. 4 (2020): ​2955​-2955​. ​https://doi.org/10.1099/ijsem.0.004039.
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  • 2020 | Journal Article
    ​ ​Flaiz, Maximilian, Tina Baur, Sven Brahner, Anja Poehlein, Rolf Daniel, and Frank R. Bengelsdorf. "Caproicibacter fermentans gen. nov., sp. nov., a new caproate-producing bacterium and emended description of the genus Caproiciproducens​." ​International Journal of Systematic and Evolutionary Microbiology ​70, no. 7 (2020): ​4269​-4279​. ​https://doi.org/10.1099/ijsem.0.004283.
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  • 2020 | Journal Article
    ​ ​Alio, Ifey, Mirja Gudzuhn, Pablo Pérez García, Dominik Danso, Marie Charlotte Schoelmerich, Uwe Mamat, Ulrich E. Schaible et al. "Phenotypic and Transcriptomic Analyses of Seven Clinical Stenotrophomonas maltophilia Isolates Identify a Small Set of Shared and Commonly Regulated Genes Involved in the Biofilm Lifestyle​." ​Applied and Environmental Microbiology ​86, no. 24 (2020): . ​https://doi.org/10.1128/AEM.02038-20.
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  • 2020 | Journal Article
    ​ ​Tiede, Julia, Melanie Diepenbruck, Jürgen Gadau, Bernd Wemheuer, Rolf Daniel, and Christoph Scherber. "Seasonal variation in the diet of the serotine bat (Eptesicus serotinus): A high-resolution analysis using DNA metabarcoding​." ​Basic and Applied Ecology ​49 (2020): ​1​-12​. ​https://doi.org/10.1016/j.baae.2020.09.004.
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  • 2020 | Journal Article
    ​ ​Salgar-Chaparro, Silvia J., Genis Castillo-Villamizar, Anja Poehlein, Rolf Daniel, and Laura L. Machuca. "Complete Genome Sequence of Pseudomonas balearica Strain EC28, an Iron-Oxidizing Bacterium Isolated from Corroded Steel​." ​Microbiology resource announcements ​9, no. 19 (2020): . ​https://doi.org/10.1128/MRA.00275-20.
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  • 2020 | Journal Article
    ​ ​Aloo, Becky N., Ernest R. Mbega, Billy A. Makumba, Ines Friedrich, Robert Hertel, and Rolf Daniel. "Whole-Genome Sequences of Three Plant Growth-Promoting Rhizobacteria Isolated from Solanum tuberosum L. Rhizosphere in Tanzania​." ​Microbiology resource announcements ​9, no. 20 (2020): . ​https://doi.org/10.1128/MRA.00371-20.
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  • 2020 | Journal Article
    ​ ​Poehlein, Anja, Jacqueline Hollensteiner, Annika Dreyer, Ivana Gavrilova, and Rolf Daniel. "Complete Genome Sequence of Sporomusa termitida DSM 4440T​." ​Microbiology resource announcements ​9, no. 11 (2020): . ​https://doi.org/10.1128/MRA.00046-20.
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  • 2020 | Journal Article
    ​ ​Hollensteiner, Jacqueline, Anja Poehlein, Patrick Kloskowski, Tariq Tammam Ali, and Rolf Daniel. "Genome Sequence of Komagataeibacter saccharivorans Strain JH1, Isolated from Fruit Flies​." ​Microbiology resource announcements ​9, no. 13 (2020): . ​https://doi.org/10.1128/MRA.00098-20.
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  • 2020 | Journal Article
    ​ ​Schneider, Dominik, Nils Aßmann, Dennis Wicke, Anja Poehlein, and Rolf Daniel. "Metagenomes of Wastewater at Different Treatment Stages in Central Germany​." ​Microbiology resource announcements ​9, no. 15 (2020): . ​https://doi.org/10.1128/MRA.00201-20.
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  • 2020 | Journal Article
    ​ ​Klewing, Anika, Byoung‐Mo Koo, Larissa Krüger, Anja Poehlein, Daniel Reuß, Rolf Daniel, Carol A. Gross, and Jörg Stülke. "Resistance to serine in Bacillus subtilis : identification of the serine transporter YbeC and of a metabolic network that links serine and threonine metabolism​." ​Environmental Microbiology ​22, no. 9 (2020): ​3937​-3949​. ​https://doi.org/10.1111/1462-2920.15179.
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  • 2020 | Journal Article
    ​ ​Schüler, Miriam A, Benjamin A Stegmann, Anja Poehlein, Rolf Daniel, and Peter Dürre. "Genome sequence analysis of the temperate bacteriophage TBP2 of the solvent producer Clostridium saccharoperbutylacetonicum N1-4 (HMT, ATCC 27021)​." ​FEMS Microbiology Letters ​367, no. 14 (2020): . ​https://doi.org/10.1093/femsle/fnaa103.
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  • 2020 | Journal Article
    ​ ​Aloo, B. N., E. R. Mbega, B. A. Makumba, R. Hertel, and R. Daniel. "Molecular Identification and In Vitro Plant Growth-Promoting Activities of Culturable Potato (Solanum tuberosum L.) Rhizobacteria in Tanzania​." ​Potato Research (2020): . ​https://doi.org/10.1007/s11540-020-09465-x.
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  • 2020 | Journal Article
    ​ ​Krüger, Larissa, Christina Herzberg, Robert Warneke, Anja Poehlein, Janina Stautz, Martin Weiß, Rolf Daniel, Inga Hänelt, and Jörg Stülke. "Two Ways To Convert a Low-Affinity Potassium Channel to High Affinity: Control of Bacillus subtilis KtrCD by Glutamate​." ​Journal of Bacteriology ​202, no. 12 (2020): . ​https://doi.org/10.1128/JB.00138-20.
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  • 2020 | Journal Article | 
    ​ ​Egelkamp, Richard, Ines Friedrich, Robert Hertel, and Rolf Daniel. "From sequence to function: a new workflow for nitrilase identification​." ​Applied Microbiology and Biotechnology ​104, no. 11 (2020): ​4957​-4970​. ​https://doi.org/10.1007/s00253-020-10544-9.
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  • 2020 | Journal Article | 
    ​ ​Redl, Stephanie, Anja Poehlein, Carola Esser, Frank R. Bengelsdorf, Torbjørn Ø. Jensen, Christian B. Jendresen, Brian J. Tindall, Rolf Daniel, Peter Dürre, and Alex T. Nielsen. "Genome-Based Comparison of All Species of the Genus Moorella, and Status of the Species Moorella thermoacetica and Moorella thermoautotrophica​." ​Frontiers in Microbiology ​10 (2020): . ​https://doi.org/10.3389/fmicb.2019.03070.
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  • 2020 | Journal Article | Research Paper | 
    ​ ​Ballauff, Johannes, Delphine Clara Zemp, Dominik Schneider, Bambang Irawan, Rolf Daniel, and Andrea Polle. "Legacy Effects Overshadow Tree Diversity Effects on Soil Fungal Communities in Oil Palm-Enrichment Plantations​." ​Microorganisms ​8, no. 10 (2020): ​1577​. ​https://doi.org/10.3390/microorganisms8101577.
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  • 2020 | Journal Article | 
    ​ ​Nguyen, Dung Quang, Dominik Schneider, Nicole Brinkmann, Bin Song, Dennis Janz, Ingo Schöning, Rolf Daniel, Rodica Pena, and Andrea Polle. "Soil and root nutrient chemistry structure root‐associated fungal assemblages in temperate forests​." ​Environmental Microbiology ​22, no. 8 (2020): ​3081​-3095​. ​https://doi.org/10.1111/1462-2920.15037.
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  • 2020 | Journal Article | Research Paper | 
    ​ ​Berkelmann, Dirk, Dominik Schneider, Anja Meryandini, and Rolf Daniel. "Unravelling the effects of tropical land use conversion on the soil microbiome​." ​Environmental Microbiome ​15, no. 1 (2020): . ​https://doi.org/10.1186/s40793-020-0353-3.
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  • 2020 | Journal Article | 
    ​ ​Perez, María Florencia, Daniel Kurth, María Eugenia Farías, Mariana Noelia Soria, Genis Andrés Castillo Villamizar, Anja Poehlein, Rolf Daniel, and Julián Rafael Dib. "First Report on the Plasmidome From a High-Altitude Lake of the Andean Puna​." ​Frontiers in Microbiology ​11 (2020): . ​https://doi.org/10.3389/fmicb.2020.01343.
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  • 2020 | Journal Article | 
    ​ ​Friedrich, Ines, Jacqueline Hollensteiner, Dominik Schneider, Anja Poehlein, Robert Hertel, and Rolf Daniel. "First Complete Genome Sequences of Janthinobacterium lividum EIF1 and EIF2 and Their Comparative Genome Analysis​." ​Genome Biology and Evolution ​12, no. 10 (2020): ​1782​-1788​. ​https://doi.org/10.1093/gbe/evaa148.
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Hollensteiner, Jacqueline, Dominik Schneider, Anja Poehlein, and Rolf Daniel. "Complete Genome of Roseobacter ponti DSM 106830T​." ​Genome Biology and Evolution ​12, no. 7 (2020): ​1013​-1018​. ​https://doi.org/10.1093/gbe/evaa114.
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Berkelmann, Dirk, Nina Hennings, Anja Meryandini, Rolf Daniel, and Dominik Schneider. "Soil bacterial community structures in relation to different oil palm management practices​." ​Scientific Data ​7, no. 1 (2020): . ​https://doi.org/10.1038/s41597-020-00752-3.
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Wemheuer, Franziska, Jessica A. Taylor, Rolf Daniel, Emma Johnston, Peter Meinicke, Torsten Thomas, and Bernd Wemheuer. "Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences​." ​Environmental Microbiome ​15, no. 1 (2020): . ​https://doi.org/10.1186/s40793-020-00358-7.
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  • 2020 | Journal Article | 
    ​ ​Wischer, Daniela, Dominik Schneider, Anja Poehlein, Friederike Herrmann, Harun Oruc, Junias Meinhardt, Olaf Wagner et al. "Novel Antimicrobial Cellulose Fleece Inhibits Growth of Human-Derived Biofilm-Forming Staphylococci During the SIRIUS19 Simulated Space Mission​." ​Frontiers in Microbiology ​11 (2020): . ​https://doi.org/10.3389/fmicb.2020.01626.
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  • 2020 | Journal Article | 
    ​ ​Fussmann, Dario, Avril Jean Elisabeth von Hoyningen-Huene, Andreas Reimer, Dominik Schneider, Hana Babková, Robert Peticzka, Andreas Maier, Gernot Arp, Rolf Daniel, and Patrick Meister. "Authigenic formation of Ca-Mg carbonates in the shallow alkaline Lake Neusiedl, Austria​." ​Biogeosciences ​17, no. 7 (2020): ​2085​-2106​. ​https://doi.org/10.5194/bg-17-2085-2020.
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  • 2020 | Journal Article | Research Paper | 
    ​ ​Grass, Ingo, Christoph Kubitza, Vijesh V. Krishna, Marife D. Corre, Oliver Mußhoff, Peter Pütz, Jochen Drescher et al. "Trade-offs between multifunctionality and profit in tropical smallholder landscapes​." ​Nature Communications ​11, no. 1 (2020): ​1186​. ​https://doi.org/10.1038/s41467-020-15013-5.
    ​Details  DOI  PMID  PMC 
  • 2020 | Journal Article | 
    ​ ​Wemheuer, Franziska, Dirk Berkelmann, Bernd Wemheuer, Rolf Daniel, Stefan Vidal, and Hervé Bertin Bisseleua Daghela. "Agroforestry Management Systems Drive the Composition, Diversity, and Function of Fungal and Bacterial Endophyte Communities in Theobroma Cacao Leaves​." ​Microorganisms ​8, no. 3 (2020): ​405​. ​https://doi.org/10.3390/microorganisms8030405.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Steinert, Georg, Bernd Wemheuer, Dorte Janussen, Dirk Erpenbeck, Rolf Daniel, Meinhard Simon, Thorsten Brinkhoff, and Peter J. Schupp. "Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges​." ​Frontiers in Marine Science ​6 (2019): . ​https://doi.org/10.3389/fmars.2019.00297.
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  • 2019 | Journal Article
    ​ ​Hollensteiner, Jacqueline, Anja Poehlein, and Rolf Daniel. "Complete Genome Sequence of Marinobacter sp. Strain JH2, Isolated from Seawater of the Kiel Fjord​." ​Microbiology resource announcements ​8, no. 30 (2019): . ​https://doi.org/10.1128/MRA.00596-19.
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  • 2019 | Journal Article
    ​ ​Bengelsdorf, Frank R., Anja Poehlein, Rolf Daniel, and Peter Dürre. "Genome Sequence of the Caproic Acid-Producing Bacterium Caproiciproducens galactitolivorans BS-1T (JCM 30532)​." ​Microbiology resource announcements ​8, no. 31 (2019): . ​https://doi.org/10.1128/MRA.00346-19.
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  • 2019 | Journal Article
    ​ ​Gundlach, Jan, Larissa Krüger, Christina Herzberg, Asan Turdiev, Anja Poehlein, Igor Tascón, Martin Weiss et al. "Sustained sensing in potassium homeostasis: Cyclic di-AMP controls potassium uptake by KimA at the levels of expression and activity​." ​Journal of Biological Chemistry ​294, no. 24 (2019): ​9605​-9614​. ​https://doi.org/10.1074/jbc.RA119.008774.
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Dinter, Thomas, Simone Geihser, Matthias Gube, Rolf Daniel, and Yakov Kuzyakov. "Impact of sea level change on coastal soil organic matter, priming effects and prokaryotic community assembly​." ​FEMS Microbiology Ecology ​95, no. 10 (2019): . ​https://doi.org/10.1093/femsec/fiz129.
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Egelkamp, Richard, Till Zimmermann, Dominik Schneider, Robert Hertel, and Rolf Daniel. "Impact of Nitriles on Bacterial Communities​." ​Frontiers in Environmental Science ​7 (2019): ​103​. ​https://doi.org/10.3389/fenvs.2019.00103.
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Pratama, Rahadian, Dominik Schneider, Tim Böer, and Rolf Daniel. "First Insights Into Bacterial Gastrointestinal Tract Communities of the Eurasian Beaver (Castor fiber)​." ​Frontiers in Microbiology ​10 (2019): ​1646​. ​https://doi.org/10.3389/fmicb.2019.01646.
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Rudolph, Katja, Claudia Fichtel, Dominik Schneider, Michael Heistermann, Flávia Koch, Rolf Daniel, and Peter M. Kappeler. "One size fits all? Relationships among group size, health, and ecology indicate a lack of an optimal group size in a wild lemur population​." ​Behavioral Ecology and Sociobiology ​73, no. 9 (2019): . ​https://doi.org/10.1007/s00265-019-2746-0.
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​Reuß, Daniel R, Patrick Faßhauer, Philipp Joel Mroch, Inam Ul-Haq, Byoung-Mo Koo, Anja Pöhlein, Carol A Gross, Rolf Daniel, Sabine Brantl, and Jörg Stülke. "Topoisomerase IV can functionally replace all type 1A topoisomerases in Bacillus subtilis​." ​Nucleic Acids Research ​47, no. 10 (2019): ​5231​-5242​. ​https://doi.org/10.1093/nar/gkz260.
    ​Details  DOI 
  • 2019 | Preprint
    ​ ​Fussmann, Dario, Avril Jean Elisabeth von Hoyningen-Huene, Andreas Reimer, Dominik Schneider, Hana Babková, Robert Peticzka, Andreas Maier, Gernot Arp, Rolf Daniel, and Patrick Meister​. "Authigenic formation of Ca-Mg carbonates in the shallow alkaline Lake Neusiedl, Austria​." ​Preprint, submitted ​​2019. https://doi.org/10.5194/bg-2019-449.
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Bakenhus, Insa, Bernd Wemheuer, Pinar Akyol, Helge-Ansgar Giebel, Leon Dlugosch, Rolf Daniel, and Meinhard Simon. "Distinct relationships between fluorescence in situ hybridization and 16S rRNA gene- and amplicon-based sequencing data of bacterioplankton lineages​." ​Systematic and Applied Microbiology ​42, no. 5 (2019): ​126000​. ​https://doi.org/10.1016/j.syapm.2019.06.005.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Lu, Mingji, Amélie Dukunde, and Rolf Daniel. "Biochemical profiles of two thermostable and organic solvent-tolerant esterases derived from a compost metagenome​." ​Applied microbiology and biotechnology ​103, no. 8 (2019): ​3421​-3437​. ​https://doi.org/10.1007/s00253-019-09695-1.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Lüneberg, Kathia, Dominik Schneider, Nicole Brinkmann, Christina Siebe, and Rolf Daniel. "Land Use Change and Water Quality Use for Irrigation Alters Drylands Soil Fungal Community in the Mezquital Valley, Mexico​." ​Frontiers in Microbiology ​10 (2019): ​1220​. ​https://doi.org/10.3389/fmicb.2019.01220.
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  • 2019 | Journal Article
    ​ ​Schröter, Kristina, Bernd Wemheuer, Rodica Pena, Ingo Schöning, Martin Ehbrecht, Peter Schall, Christian Ammer, Rolf Daniel, and Andrea Polle. "Assembly processes of trophic guilds in the root mycobiome of temperate forests​." ​Molecular Ecology ​28, no. 2 (2019): ​348​-364​. ​https://doi.org/10.1111/mec.14887.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Castillo Villamizar, Genis Andrés, Katrina Funkner, Heiko Nacke, Karolin Foerster, and Rolf Daniel. "Functional Metagenomics Reveals a New Catalytic Domain, the Metallo-β-Lactamase Superfamily Domain, Associated with Phytase Activity​." ​mSphere ​4, no. 3 (2019): . ​https://doi.org/10.1128/mSphere.00167-19.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | Research Paper | 
    ​ ​Schulz, Garvin, Dominik Schneider, Nicole Brinkmann, Nur Edy, Rolf Daniel, Andrea Polle, Stefan Scheu, and Valentyna Krashevska. "Changes in Trophic Groups of Protists With Conversion of Rainforest Into Rubber and Oil Palm Plantations​." ​Frontiers in Microbiology ​10 (2019): ​240​. ​https://doi.org/10.3389/fmicb.2019.00240.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Wemheuer, Franziska, Avril Jean Elisabeth von Hoyningen-Huene, Marion Pohlner, Julius Degenhardt, Bert Engelen, Rolf Daniel, and Bernd Wemheuer. "Primary Production in the Water Column as Major Structuring Element of the Biogeographical Distribution and Function of Archaea in Deep-Sea Sediments of the Central Pacific Ocean​." ​Archaea ​2019 (2019): ​3717239​. ​https://doi.org/10.1155/2019/3717239.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Wemheuer, Franziska, Bernd Wemheuer, Rolf Daniel, and Stefan Vidal. "Deciphering bacterial and fungal endophyte communities in leaves of two maple trees with green islands​." ​Scientific Reports ​9, no. 1 (2019): ​14183​. ​https://doi.org/10.1038/s41598-019-50540-2.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Pinter, Niko, Christina Andrea Hach, Martin Hampel, Dmitrij Rekhter, Krzysztof Zienkiewicz, Ivo Feußner, Anja Poehlein, Rolf Daniel, Florian Finkernagel, and Kai Heimel. "Signal peptide peptidase activity connects the unfolded protein response to plant defense suppression by Ustilago maydis​." ​PLOS Pathogens ​15, no. 4 (2019): ​e1007734​. ​https://doi.org/10.1371/journal.ppat.1007734.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Castillo Villamizar, Genis Andrés, Heiko Nacke, Marc Boehning, Kristin Herz, and Rolf Daniel. "Functional Metagenomics Reveals an Overlooked Diversity and Novel Features of Soil-Derived Bacterial Phosphatases and Phytases​." ​mBio ​10, no. 1 (2019): ​e01966-18​. ​https://doi.org/10.1128/mBio.01966-18.
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​von Hoyningen-Huene, Avril Jean Elisabeth, Dominik Schneider, Dario Fussmann, Andreas Reimer, Gernot Arp, and Rolf Daniel. "Bacterial succession along a sediment porewater gradient at Lake Neusiedl in Austria​." ​Scientific Data ​6, no. 1 (2019): ​163​. ​https://doi.org/10.1038/s41597-019-0172-9.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Kremp, Florian, Anja Poehlein, Rolf Daniel, and Volker Müller. "Methanol metabolism in the acetogenic bacterium Acetobacterium woodii​." ​Environmental Microbiology ​20, no. 12 (2018): ​4369​-4384​. ​https://doi.org/10.1111/1462-2920.14356.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Nasfi, Zina, Anja Poehlein, Henrik Harms, Emilie Goralski, Katja M. Fisch, Rolf Daniel, Gabriele M. König, Till F. Schäberle, and Rafik Bachoual. "Draft Genome Sequence of Bacillus sp. Strain M21, Isolated from the Arid Area of Matmata, Tunisia​." ​Genome Announcements ​6, no. 17 (2018): . ​https://doi.org/10.1128/genomeA.00323-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Amiri Moghaddam, Jamshid, Anja Poehlein, Katja Fisch, Mohammad Alanjary, Rolf Daniel, Gabriele M. König, and Till F. Schäberle. "Draft Genome Sequences of the Obligatory Marine Myxobacterial Strains Enhygromyxa salina SWB005 and SWB007​." ​Genome Announcements ​6, no. 17 (2018): . ​https://doi.org/10.1128/genomeA.00324-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Zhang, Qingyang, Anja Poehlein, Jacqueline Hollensteiner, and Rolf Daniel. "Draft Genome Sequence of Komagataeibacter maltaceti LMG 1529 T , a Vinegar-Producing Acetic Acid Bacterium Isolated from Malt Vinegar Brewery Acetifiers​." ​Genome Announcements ​6, no. 16 (2018): ​e00330-18​. ​https://doi.org/10.1128/genomeA.00330-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Simon Bolz, Berenice Fischer, and Rolf Daniel. "First Insight into the Genome Sequence of Clostridium vincentii DSM 10228, Isolated from Sediment of the McMurdo Ice Shelf, Antarctica​." ​Genome Announcements ​6, no. 15 (2018): ​e00334-18​. ​https://doi.org/10.1128/genomeA.00334-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Meinert, Christina, Marc Schürmann, Jan-Eike Domeyer, Anja Poehlein, Rolf Daniel, and Alexander Steinbüchel. "The unexpected function of a Flavin-dependent oxidoreductase (Fox) from Variovorax paradoxus TBEA6.​." ​FEMS Microbiology Letters (2018): . ​https://doi.org/10.1093/femsle/fny011.
    ​Details  DOI 
  • 2018 | Monograph
    ​ ​Daniel, Rolf, Meinhard Simon, and Bernd Wemheuer. Molecular ecology and genetic diversity of the Roseobacter clade​. ​​Frontiers Media SA, ​2018. https://doi.org/10.3389/978-2-88945-538-6.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Daniel Heym, Vivien Quitzke, Julia Fersch, Rolf Daniel, and Michael Rother. "Complete Genome Sequence of the Methanococcus maripaludis Type Strain JJ (DSM 2067), a Model for Selenoprotein Synthesis in Archaea​." ​Genome Announcements ​6, no. 14 (2018): . ​https://doi.org/10.1128/genomeA.00237-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Hannes Neubauer, Philipp Niemeyer, and Rolf Daniel. "First Insight into the Genome Sequence of Clostridium liquoris DSM 100320, a Butyrate- and Ethanol-Producing Bacterium​." ​Genome Announcements ​6, no. 18 (2018): . ​https://doi.org/10.1128/genomeA.00376-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Rica Bremekamp, Veronika Theresa Lutz, Lisa Maria Schulz, and Rolf Daniel. "Draft Genome Sequence of the Butanoic Acid-Producing Bacterium Clostridium luticellarii DSM 29923, Used for Strong Aromatic Chinese Liquor Production​." ​Genome Announcements ​6, no. 18 (2018): . ​https://doi.org/10.1128/genomeA.00377-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Eva Hettwer, Lennart Mohnike, and Rolf Daniel. "First Insights into the Genome Sequence of Clostridium thermopalmarium DSM 5974, a Butyrate-Producing Bacterium Isolated from Palm Wine​." ​Genome Announcements ​6, no. 17 (2018): . ​https://doi.org/10.1128/genomeA.00338-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Alisa Keyl, Jan C. Milsch, and Rolf Daniel. "Draft Genome Sequence of the Thermophilic Acetogen Moorella humiferrea DSM 23265​." ​Genome Announcements ​6, no. 17 (2018): . ​https://doi.org/10.1128/genomeA.00357-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Poehlein, Anja, Tim Böer, Kerrin Steensen, and Rolf Daniel. "Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271​." ​Genome Announcements ​6, no. 18 (2018): . ​https://doi.org/10.1128/genomeA.00345-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Reuß, Daniel R., Hermann Rath, Andrea Thürmer, Martin Benda, Rolf Daniel, Uwe Völker, Ulrike Mäder, Fabian M. Commichau, and Jörg Stülke. "Changes of DNA topology affect the global transcription landscape and allow rapid growth of a Bacillus subtilis mutant lacking carbon catabolite repression​." ​Metabolic Engineering ​45 (2018): ​171​-179​. ​https://doi.org/10.1016/j.ymben.2017.12.004.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Schilling, Tobias, Michael Hoppert, Rolf Daniel, and Robert Hertel. "Complete Genome Sequence of vB_BveP-Goe6, a Virus Infecting Bacillus velezensis FZB42​." ​Genome Announcements ​6, no. 8 (2018): . ​https://doi.org/10.1128/genomeA.00008-18.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Dib, Julian Rafael, María Florencia Perez, Jörg Schuldes, Anja Poehlein, Martin Wagenknecht, María E. Farías, Friedhelm Meinhardt, and Rolf Daniel. "Complete Genome Sequences of pLMA1 and pLMA7, Two Large Linear Plasmids of Micrococcus Strains Isolated from a High-Altitude Lake in Argentina​." ​Genome Announcements ​6, no. 8 (2018): . ​https://doi.org/10.1128/genomeA.00010-18.
    ​Details  DOI 
  • 2018 | Preprint
    ​ ​Wemheuer, Franziska, Jessica A. Taylor, Rolf Daniel, Emma Johnston, Peter Meinicke, Torsten Thomas, and Bernd Wemheuer​. "Tax4Fun2: a R-based tool for the rapid prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene marker gene sequences​." ​Preprint, submitted ​​2018. https://doi.org/10.1101/490037.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Schall, Peter, Martin M. Goßner, Steffi Heinrichs, Markus Fischer, Steffen Boch, Daniel Prati, Kirsten Jung et al. "The impact of even-aged and uneven-aged forest management on regional biodiversity of multiple taxa in European beech forests​." ​Journal of Applied Ecology ​55, no. 1 (2018): ​267​-278​. ​https://doi.org/10.1111/1365-2664.12950.
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Hollensteiner, Jacqueline, Anja Poehlein, Sandra Granzow, Heiko Liesegang, Rolf Daniel, Stefan Vidal, and Franziska Wemheuer. "Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM5LP Isolated from Lolium perenne​." ​Genome Announcements ​6, no. 4 (2018): . ​https://doi.org/10.1128/genomeA.01517-17.
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Bakenhus, Insa, Sonja Voget, Anja Poehlein, Thorsten Brinkhoff, Rolf Daniel, and Meinhard Simon. "Genome sequence of Planktotalea frisia type strain (SH6-1T), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom​." ​Standards in Genomic Sciences ​13, no. 1 (2018): . ​https://doi.org/10.1186/s40793-018-0311-5.
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Poehlein, Anja, Dominik Schneider, Melissa Soh, Rolf Daniel, and Henning Seedorf. "Comparative Genomic Analysis of Members of the Genera Methanosphaera and Methanobrevibacter Reveals Distinct Clades with Specific Potential Metabolic Functions​." ​Archaea ​2018 (2018): ​1​-9​. ​https://doi.org/10.1155/2018/7609847.
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Lüneberg, Kathia, Dominik Schneider, Christina Siebe, and Rolf Daniel. "Drylands soil bacterial community is affected by land use change and different irrigation practices in the Mezquital Valley, Mexico​." ​Scientific Reports ​8, no. 1 (2018): . ​https://doi.org/10.1038/s41598-018-19743-x.
    ​Details  DOI 
  • 2018 | Journal Article | Research Paper | 
    ​ ​Berkelmann, Dirk, Dominik Schneider, Martin Engelhaupt, Melanie Heinemann, Stephan Christel, Marini Wijayanti, Anja Meryandini, and Rolf Daniel. "How Rainforest Conversion to Agricultural Systems in Sumatra (Indonesia) Affects Active Soil Bacterial Communities​." ​Frontiers in Microbiology ​9 (2018): ​2381​. ​https://doi.org/10.3389/fmicb.2018.02381.
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Groß, Uwe, Elzbieta B. Brzuszkiewicz, Katrin Gunka, Jessica Starke, Thomas Riedel, Boyke Bunk, Cathrin Spröer et al. "Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile.​." ​BMC Genomics ​19, no. 1 (2018): ​1​-14​. ​https://doi.org/10.1186/s12864-017-4368-0.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Wemheuer, Franziska, Bernd Wemheuer, Jacqueline Hollensteiner, Rolf Daniel, and Anja Poehlein. "Draft Genome Sequence of the Endophyte Paenibacillus sp. Strain GM2FR Isolated from Festuca rubra​." ​Genome Announcements ​6, no. 6 (2018): ​e00017​-e00018​. ​https://doi.org/10.1128/genomeA.00017-18.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Wemheuer, Franziska, Jacqueline Hollensteiner, Anja Poehlein, Heiko Liesegang, Rolf Daniel, and Bernd Wemheuer. "Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne​." ​Genome Announcements ​6, no. 5 (2018): . ​https://doi.org/10.1128/genomeA.00011-18.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | 
    ​ ​Sann, Christina, Franziska Wemheuer, Alexis Beaurepaire, Rolf Daniel, Silvio Erler, and Stefan Vidal. "Preliminary Investigation of Species Diversity of Rice Hopper Parasitoids in Southeast Asia.​." ​Insects ​9, no. 1 (2018): ​1​-12​. ​https://doi.org/10.3390/insects9010019.
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Editorial Contribution (Editorial, Introduction, Epilogue)
    ​ ​Daniel, Rolf, Meinhard Simon, and Bernd Wemheuer. "Editorial: Molecular Ecology and Genetic Diversity of the Roseobacter Clade​." ​Frontiers in Microbiology ​9 (2018): ​1185​. ​https://doi.org/10.3389/fmicb.2018.01185.
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | 
    ​ ​Schneider, Dominik, Andrea Thürmer, Kathleen Gollnow, Raimond Lugert, Katrin Gunka, Uwe Groß, and Rolf Daniel. "Gut bacterial communities of diarrheic patients with indications of Clostridioides difficile infection.​." ​Scientific data ​4 (2017): ​170152​. ​https://doi.org/10.1038/sdata.2017.152.
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article
    ​ ​Villamizar, Genis Andrés Castillo, Rolf Daniel, and Anja Poehlein. "First Insights into the Genome Sequence of the Strictly Anaerobic Homoacetogenic Sporomusa sphaeroides Strain E (DSM 2875)​." ​Genome Announcements ​5, no. 12 (2017): . ​https://doi.org/10.1128/genomeA.00037-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Nacke, Heiko, Rolf Daniel, and Anja Poehlein. "Genome Sequence of Creatinine-Fermenting Tissierella creatinophila Strain KRE 4T (DSM 6911)​." ​Genome Announcements ​5, no. 12 (2017): . ​https://doi.org/10.1128/genomeA.00051-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Rolf Daniel, Andrea Thürmer, Alexander Bollinger, Stephan Thies, Nadine Katzke, and Karl-Erich Jaeger. "First Insights into the Genome Sequence of Pseudomonas oleovorans DSM 1045​." ​Genome Announcements ​5, no. 32 (2017): . ​https://doi.org/10.1128/genomeA.00774-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Michael Y. Galperin, Jan R. Andreesen, and Rolf Daniel. "Genome Sequence of Uric Acid-Fermenting Eubacterium angustum DSM 1989T (MK-1)​." ​Genome Announcements ​5, no. 2 (2017): . ​https://doi.org/10.1128/genomeA.01439-16.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Nacke, Heiko, Ingo Schöning, Malte Schindler, Marion Schrumpf, Rolf Daniel, Graeme W. Nicol, and James I. Prosser. "Links between seawater flooding, soil ammonia oxidiser communities and their response to changes in salinity​." ​FEMS Microbiology Ecology ​93, no. 11 (2017): . ​https://doi.org/10.1093/femsec/fix144.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Gabris, Christina, Anja Poehlein, Frank R. Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of Lactobacillus sunkii Strain CG_D​." ​Genome Announcements ​5, no. 2 (2017): . ​https://doi.org/10.1128/genomeA.01487-16.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Gabris, Christina, Anja Poehlein, Frank R. Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of Enterococcus faecalis Strain CG_E​." ​Genome Announcements ​5, no. 2 (2017): . ​https://doi.org/10.1128/genomeA.01488-16.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Jan Hendrik Wübbeler, Rolf Daniel, and Alexander Steinbüchel. "Draft Genome Sequences of Sphingomonas mucosissima DSM 17494 and Sphingomonas dokdonensis DSM 21029​." ​Genome Announcements ​5, no. 35 (2017): . ​https://doi.org/10.1128/genomeA.00889-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Anna Lena Gippert, Maaike J. Bierenbroodspot, and Rolf Daniel. "First Insights into the Genome Sequence of Clostridium oryzae DSM 28571, Isolated from the Soil of a Japanese Rice Field​." ​Genome Announcements ​5, no. 24 (2017): . ​https://doi.org/10.1128/genomeA.00539-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Nils Höche, Alexander Mehr, and Rolf Daniel. "First Insights into the Genome of the Cr(VI)-Reducing Bacterium Clostridium chromiireducens DSM 23318​." ​Genome Announcements ​5, no. 22 (2017): . ​https://doi.org/10.1128/genomeA.00420-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Karl, Michael M., Anja Poehlein, Frank R. Bengelsdorf, Rolf Daniel, and Peter Dürre. "Complete Genome Sequence of the Autotrophic Acetogen Clostridium formicaceticum DSM 92T Using Nanopore and Illumina Sequencing Data​." ​Genome Announcements ​5, no. 21 (2017): . ​https://doi.org/10.1128/genomeA.00423-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Humphreys, Jonathan R., Rolf Daniel, and Anja Poehlein. "Genome Sequence of the Homoacetogenic, Gram-Negative, Endospore-Forming Bacterium Sporomusa acidovorans DSM 3132​." ​Genome Announcements ​5, no. 38 (2017): . ​https://doi.org/10.1128/genomeA.00981-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Gundlach, Jan, Christina Herzberg, Dietrich Hertel, Andrea Thürmer, Rolf Daniel, Hannes Link, and Jörg Stülke. "Adaptation of Bacillus subtilis to Life at Extreme Potassium Limitation​." ​mBio ​8, no. 4 (2017): . ​https://doi.org/10.1128/mBio.00861-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Abirami Anbalagan, Alexandra Nagel, and Rolf Daniel. "First Insight into the Genome Sequence of Clostridium thermobutyricum DSM 4928, a Butyrate-Producing Moderate Thermophile​." ​Genome Announcements ​5, no. 20 (2017): . ​https://doi.org/10.1128/genomeA.00367-17.
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Katrina Funkner, Miriam A. Schüler, and Rolf Daniel. "First Insights into the Genome Sequence of the Cellulolytic Bacterium Clostridium hungatei DSM 14427​." ​Genome Announcements ​5, no. 20 (2017): . ​https://doi.org/10.1128/genomeA.00363-17.
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  • 2017 | Journal Article
    ​ ​Poehlein, Anja, Alexandra Berg, Gina Welsing, and Rolf Daniel. "First Insights into the Genome Sequence of the Alkaliphilic Thermotolerant Bacterium Clostridium thermoalcaliphilum JW/YL23-2T​." ​Genome Announcements ​5, no. 20 (2017): . ​https://doi.org/10.1128/genomeA.00368-17.
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  • 2017 | Journal Article
    ​ ​Braun, Christoph, Andrea Thürmer, Rolf Daniel, Anne-Kathrin Schultz, Ingo Bulla, Horst Schirrmeier, Dietmar Mayer, Andreas Neubert, and Claus-Peter Czerny. "Genetic Variability of Myxoma Virus Genomes​." ​Journal of Virology ​91, no. 4 (2017): . ​https://doi.org/10.1128/JVI.01570-16.
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  • 2017 | Journal Article
    ​ ​Humphreys, Jonathan R., Rolf Daniel, and Anja Poehlein. "Insights into the Genome of the Anaerobic Acetogen Sporomusa silvacetica DSM 10669​." ​Genome Announcements ​5, no. 38 (2017): . ​https://doi.org/10.1128/genomeA.00983-17.
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  • 2017 | Journal Article
    ​ ​Reyes, Carolina, Dominik Schneider, Andrea Thürmer, Ajinkya Kulkarni, Marko Lipka, Saar Y. Sztejrenszus, Michael E. Böttcher, Rolf Daniel, and Michael W. Friedrich. "Potentially Active Iron, Sulfur, and Sulfate Reducing Bacteria in Skagerrak and Bothnian Bay Sediments​." ​Geomicrobiology Journal ​34, no. 10 (2017): ​840​-850​. ​https://doi.org/10.1080/01490451.2017.1281360.
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  • 2017 | Journal Article
    ​ ​Peters, Björn, Markus Mientus, David Kostner, Rolf Daniel, Wolfgang Liebl, and Armin Ehrenreich. "Expression of membrane-bound dehydrogenases from a mother of vinegar metagenome in Gluconobacter oxydans​." ​Applied Microbiology and Biotechnology ​101, no. 21 (2017): ​7901​-7912​. ​https://doi.org/10.1007/s00253-017-8479-y.
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  • 2017 | Journal Article
    ​ ​Ammer, Christian, Peter Schall, Martin M. Goßner, Markus Fischer, Steffi Heinrichs, Steffen Boch, Daniel Prati et al. "Waldbewirtschaftung und Biodiversität: Vielfalt ist gefragt​." ​AFZ, der Wald ​72, no. 17 (2017): ​20​-25​. ​
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  • 2017 | Journal Article | 
    ​ ​Hollensteiner, Jacqueline, Franziska Wemheuer, Rebekka Harting, Anna M. Kolarzyk, Stefani M. Diaz Valeria, Anja Poehlein, Elzbieta B. Brzuszkiewicz et al. "Bacillus thuringiensis and Bacillus weihenstephanensis Inhibit the Growth of Phytopathogenic Verticillium Species​." ​Frontiers in Microbiology ​7 (2017): ​2171​. ​https://doi.org/10.3389/fmicb.2016.02171.
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  • 2017 | Journal Article | 
    ​ ​Wübbeler, Jan Hendrik, Fred Bernd Oppermann-Sanio, Andrea Ockenfels, Annika Röttig, Alena Osthaar-Ebker, Susanne Verbarg, Anja Poehlein et al. "Sphingomonas jeddahensis sp. nov., isolated from Saudi Arabian desert soil​." ​International Journal of Systematic and Evolutionary Microbiology ​67, no. 10 (2017): ​4057​-4063​. ​https://doi.org/10.1099/ijsem.0.002249.
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  • 2017 | Journal Article | Erratum | 
    ​ ​Poehlein, Anja, Natalya Yutin, Rolf Daniel, and Michael Y. Galperin. "Erratum: Proposal for the reclassification of obligately purine-fermenting bacteria Clostridium acidurici (Barker 1938) and Clostridium purinilyticum (Dürre et al. 1981) as Gottschalkia acidurici gen. nov. comb. nov. and Gottschalkia purinilytica comb. nov. and of Eubacterium angustum (Beuscher and Andreesen 1985) as Andreesenia angusta gen. nov. comb. nov. in the family Gottschalkiaceae fam. nov.​." ​International Journal of Systematic and Evolutionary Microbiology ​67, no. 10 (2017): ​4287​-4288​. ​https://doi.org/10.1099/ijsem.0.002362.
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  • 2017 | Journal Article | 
    ​ ​Poehlein, Anja, Natalya Yutin, Rolf Daniel, and Michael Y. Galperin. "Proposal for the reclassification of obligately purine-fermenting bacteria Clostridium acidurici (Barker 1938) and Clostridium purinilyticum (Dürre et al. 1981) as Gottschalkia acidurici gen. nov. comb. nov. and Gottschalkia purinilytica comb. nov. and of Eubacterium angustum (Beuscher and Andreesen 1985) as Andreesenia angusta gen. nov. comb. nov. in the family Gottschalkiaceae fam. nov.​." ​International Journal of Systematic and Evolutionary Microbiology ​67, no. 8 (2017): ​2711​-2719​. ​https://doi.org/10.1099/ijsem.0.002008.
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  • 2017 | Journal Article | 
    ​ ​Wemheuer, Franziska, Kristin Kaiser, Petr Karlovsky, Rolf Daniel, Stefan Vidal, and Bernd Wemheuer. "Bacterial endophyte communities of three agricultural important grass species differ in their response towards management regimes​." ​Scientific Reports ​7 (2017): ​40914​. ​https://doi.org/10.1038/srep40914.
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  • 2017 | Journal Article
    ​ ​Wemheuer, Franziska, Jacqueline Hollensteiner, Anja Poehlein, Sandra Granzow, Rolf Daniel, Stefan Vidal, and Bernd Wemheuer. "Draft Genome Sequence of Pseudomonas putida Strain GM4FR, an Endophytic Bacterium Isolated from Festuca rubra L​." ​Genome Announcements ​5, no. 13 (2017): . ​https://doi.org/10.1128/genomeA.00086-17.
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  • 2017 | Book Chapter
    ​ ​Schneider, Dominik, Franziska Wemheuer, Birgit Pfeiffer, and Bernd Wemheuer. "Extraction of Total DNA and RNA from Marine Filter Samples and Generation of a cDNA as Universal Template for Marker Gene Studies​." ​In Metagenomics. Methods in Molecular Biology, edited by W. Streit, R. Daniel​, 13​-22​. ​Vol. 1539 ​New York, NY: ​Humana Press, ​2017. https://doi.org/10.1007/978-1-4939-6691-2_2.
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  • 2017 | Book Chapter
    ​ ​Wemheuer, Bernd, and Franziska Wemheuer. "Assessing Bacterial and Fungal Diversity in the Plant Endosphere​." ​In Metagenomics. Methods in Molecular Biology, edited by W. Streit, R. Daniel​, 75​-84​. ​Vol. 1539 ​New York, NY: ​Humana Press, ​2017. https://doi.org/10.1007/978-1-4939-6691-2_6.
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  • 2017 | Journal Article
    ​ ​Dogs, Marco, Bernd Wemheuer, Laura Wolter, Nils Bergen, Rolf Daniel, Meinhard Simon, and Thorsten Brinkhoff. "Rhodobacteraceae on the marine brown alga Fucus spiralis are abundant and show physiological adaptation to an epiphytic lifestyle​." ​Systematic and Applied Microbiology ​40, no. 6 (2017): ​370​-382​. ​https://doi.org/10.1016/j.syapm.2017.05.006.
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  • 2017 | Journal Article | 
    ​ ​Wemheuer, Bernd, Franziska Wemheuer, Dimitri Meier, Sara Billerbeck, Helge-Ansgar Giebel, Meinhard Simon, Christoph Scherber, and Rolf Daniel. "Linking Compositional and Functional Predictions to Decipher the Biogeochemical Significance in DFAA Turnover of Abundant Bacterioplankton Lineages in the North Sea.​." ​Microorganisms ​5, no. 4 (2017): . ​https://doi.org/10.3390/microorganisms5040068.
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  • 2017 | Journal Article | 
    ​ ​Woehlbrand, Lars, Bernd Wemheuer, Christoph Feenders, Hanna S. Ruppersberg, Christina Hinrichs, Bernd Blasius, Rolf Daniel, and Ralf Rabus. "Complementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea​." ​Frontiers in Microbiology ​8 (2017): ​442​. ​https://doi.org/10.3389/fmicb.2017.00442.
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  • 2017 | Journal Article
    ​ ​Hollensteiner, Jacqueline, Anja Poehlein, Rolf Daniel, Heiko Liesegang, Stefan Vidal, and Franziska Wemheuer. "Draft Genome Sequence of Bacillus pumilus Strain GM3FR, an Endophyte Isolated from Aerial Plant Tissues of Festuca rubra L​." ​Genome Announcements ​5, no. 13 (2017): ​e00085-17​. ​https://doi.org/10.1128/genomeA.00085-17.
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  • 2017 | Journal Article | Research Paper
    ​ ​Barnes, Andrew D., Kara Allen, Holger Kreft, Marife D. Corre, Malte Jochum, Edzo Veldkamp, Yann Clough et al. "Direct and cascading impacts of tropical land-use change on multi-trophic biodiversity​." ​Nature Ecology & Evolution ​1, no. 10 (2017): ​1511​-1519​. ​https://doi.org/10.1038/s41559-017-0275-7.
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  • 2017 | Journal Article | Research Paper | 
    ​ ​Granzow, Sandra, Kristin Kaiser, Bernd Wemheuer, Birgit Pfeiffer, Rolf Daniel, Stefan Vidal, and Franziska Wemheuer. "The Effects of Cropping Regimes on Fungal and Bacterial Communities of Wheat and Faba Bean in a Greenhouse Pot Experiment Differ between Plant Species and Compartment​." ​Frontiers in Microbiology ​8 (2017): ​902​. ​https://doi.org/10.3389/fmicb.2017.00902.
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  • 2016 | Conference Paper
    ​ ​Tiede, Julia, Bernd Wemheuer, Michael Traugott, Rolf Daniel, Teja Tscharntke, Anne Ebeling, and Christoph Scherber. "Plant diversity affects multitrophic interactions in an experimental grassland​." ​In 150 years of Ecology - lessons for the future, ​295​-295. ​Marburg: ​Gesellschaft für Ökologie, ​2016. 
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  • 2016 | Journal Article
    ​ ​Poehlein, Anja, Katja Schlien, Nilanjan Pal Chowdhury, Gerhard Gottschalk, Wolfgang Buckel, and Rolf Daniel. "Complete Genome Sequence of the Amino Acid-Fermenting Clostridium propionicum X2 (DSM 1682)​." ​Genome Announcements ​4, no. 2 (2016): . ​https://doi.org/10.1128/genomeA.00294-16.
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  • 2016 | Journal Article
    ​ ​Poehlein, Anja, Katharina Mucek, Marieke Enders, Frederik Pankok, and Rolf Daniel. "First Insights into the Genome Sequence of the Halophilic Archaeon Halalkalicoccus paucihalophilus (DSM 24557)​." ​Genome Announcements ​4, no. 3 (2016): . ​https://doi.org/10.1128/genomeA.00382-16.
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  • 2016 | Journal Article
    ​ ​Poehlein, Anja, Tobias Schilling, Udhaya Bhaskar Sathya Narayanan, and Rolf Daniel. "First Insights into the Draft Genome of Clostridium colicanis DSM 13634, Isolated from Canine Feces​." ​Genome Announcements ​4, no. 3 (2016): . ​https://doi.org/10.1128/genomeA.00385-16.
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  • 2016 | Journal Article
    ​ ​Leimbach, Andreas, Anja Poehlein, Anika Witten, Olga Wellnitz, Nahum Shpigel, Wolfram Petzl, Holm Zerbe, Rolf Daniel, and Ulrich Dobrindt. "Whole-Genome Draft Sequences of Six Commensal Fecal and Six Mastitis-Associated Escherichia coli Strains of Bovine Origin: TABLE 1​." ​Genome Announcements ​4, no. 4 (2016): . ​https://doi.org/10.1128/genomeA.00753-16.
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  • 2016 | Journal Article
    ​ ​Reuß, Daniel R., Andrea Thürmer, Rolf Daniel, Wim J. Quax, and Jörg Stülke. "Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain ∆6​." ​Genome Announcements ​4, no. 4 (2016): . ​https://doi.org/10.1128/genomeA.00759-16.
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  • 2016 | Journal Article
    ​ ​Poehlein, Anja, Frank Robert Bengelsdorf, Bettina Schiel-Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of the Acetogenic Bacterium Acetobacterium wieringae DSM 1911 T​." ​Genome Announcements ​4, no. 6 (2016): . ​https://doi.org/10.1128/genomeA.01430-16.
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  • 2016 | Journal Article
    ​ ​Jag, Vanessa, Anja Poehlein, Frank R. Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of the Facultative Anaerobe Oerskovia enterophila DFA-19 (DSM 43852 T )​." ​Genome Announcements ​4, no. 5 (2016): . ​https://doi.org/10.1128/genomeA.00973-16.
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  • 2016 | Journal Article
    ​ ​Uhlig, Ronny, Anja Poehlein, Ralf-Jörg Fischer, Rolf Daniel, and Hubert Bahl. "Genome Sequence of the Autotrophic Acetogen Clostridium magnum DSM 2767​." ​Genome Announcements ​4, no. 3 (2016): . ​https://doi.org/10.1128/genomeA.00464-16.
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  • 2016 | Journal Article
    ​ ​Domik, Dajana, Andrea Thürmer, Teresa Weise, Wolfgang Brandt, Rolf Daniel, and Birgit Piechulla. "A Terpene Synthase Is Involved in the Synthesis of the Volatile Organic Compound Sodorifen of Serratia plymuthica 4Rx13​." ​Frontiers in Microbiology ​7 (2016): . ​https://doi.org/10.3389/fmicb.2016.00737.
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  • 2016 | Journal Article
    ​ ​Flüchter, Sebastian, Anja Poehlein, Bettina Schiel-Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of the Poly-3-Hydroxybutyrate Producer Clostridium acetireducens DSM 10703​." ​Genome Announcements ​4, no. 6 (2016): . ​https://doi.org/10.1128/genomeA.01399-16.
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  • 2016 | Journal Article
    ​ ​Bengelsdorf, Frank R., Anja Poehlein, Bettina Schiel-Bengelsdorf, Rolf Daniel, and Peter Dürre. "Genome Sequence of the Acetogenic Bacterium Butyribacterium methylotrophicum DSM 3468 T​." ​Genome Announcements ​4, no. 6 (2016): . ​https://doi.org/10.1128/genomeA.01338-16.
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  • 2016 | Journal Article
    ​ ​Beck, Matthias H., Anja Poehlein, Frank R. Bengelsdorf, Bettina Schiel-Bengelsdorf, Rolf Daniel, and Peter Dürre. "Draft Genome Sequence of the Strict Anaerobe Clostridium neopropionicum X4 (DSM 3847 T )​." ​Genome Announcements ​4, no. 2 (2016): . ​https://doi.org/10.1128/genomeA.00209-16.
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  • 2016 | Journal Article
    ​ ​Poehlein, Anja, Ines Friedrich, Larissa Krüger, and Rolf Daniel. "First Insights into the Genome of the Moderately Thermophilic Bacterium Clostridium tepidiprofundi SG 508 T​." ​Genome Announcements ​4, no. 3 (2016): . ​https://doi.org/10.1128/genomeA.00379-16.
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  • 2016 | Journal Article
    ​ ​Kanukollu, Saranya, Bernd Wemheuer, Janina Herber, Sara Billerbeck, Judith Lucas, Rolf Daniel, Meinhard Simon, Heribert Cypionka, and Bert Engelen. "Distinct compositions of free-living, particle-associated and benthic communities of the Roseobacter group in the North Sea​." ​FEMS Microbiology Ecology ​92, no. 1 (2016): ​fiv145​. ​https://doi.org/10.1093/femsec/fiv145.
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  • 2016 | Journal Article | Research Paper | 
    ​ ​Clough, Yann, Vijesh V. Krishna, Marife D. Corre, Kevin Darras, Lisa H. Denmead, Ana Meijide, Stefan Moser et al. "Land-use choices follow profitability at the expense of ecological functions in Indonesian smallholder landscapes​." ​Nature Communications ​7 (2016): ​13137​. ​https://doi.org/10.1038/ncomms13137.
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  • 2016 | Journal Article | 
    ​ ​Tiede, Julia, Bernd Wemheuer, Michael Traugott, Rolf Daniel, Teja Tscharntke, Anne Ebeling, and Christoph Scherber. "Trophic and Non-Trophic Interactions in a Biodiversity Experiment Assessed by Next-Generation Sequencing​." ​PLOS ONE ​11, no. 2 (2016): ​e0148781​. ​https://doi.org/10.1371/journal.pone.0148781.
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  • 2016 | Journal Article | 
    ​ ​Osterholz, Helena, Gabriel Singer, Bernd Wemheuer, Rolf Daniel, Meinhard Simon, Jutta Niggemann, and Thorsten Dittmar. "Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system​." ​The ISME Journal ​10, no. 7 (2016): ​1717​-1730​. ​https://doi.org/10.1038/ismej.2015.231.
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  • 2016 | Journal Article | 
    ​ ​Kaiser, Kristin, Bernd Wemheuer, Vera Korolkow, Franziska Wemheuer, Heiko Nacke, Ingo Schöning, Marion Schrumpf, and Rolf Daniel. "Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests​." ​Scientific Reports ​6 (2016): ​33696​. ​https://doi.org/10.1038/srep33696.
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  • 2016 | Journal Article | 
    ​ ​Poehlein, Anja, Heike Freese, Rolf Daniel, and Diliana Dancheva Simeonova. "Genome sequence of Shinella sp strain DD12, isolated from homogenized guts of starved Daphnia magna​." ​Standards in Genomic Sciences ​11 (2016): . ​https://doi.org/10.1186/s40793-015-0129-3.
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  • 2016 | Journal Article | 
    ​ ​Güllert, Simon, Martin A. Fischer, Dmitrij Turaev, Britta Noebauer, Nele Ilmberger, Bernd Wemheuer, Malik Alawi et al. "Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies​." ​Biotechnology for Biofuels ​9 (2016): ​121​. ​https://doi.org/10.1186/s13068-016-0534-x.
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  • 2016 | Journal Article
    ​ ​Wüst, Pia K., Heiko Nacke, Kristin Kaiser, Sven Marhan, Johannes Sikorski, Ellen Kandeler, Rolf Daniel, and Jörg Overmann. "Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed​." ​Applied and Environmental Microbiology ​82, no. 9 (2016): ​2595​-2607​. ​https://doi.org/10.1128/AEM.00019-16.
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  • 2016 | Journal Article
    ​ ​Billerbeck, Sara, Bernd Wemheuer, Sonja Voget, Anja Poehlein, Helge-Ansgar Giebel, Thorsten Brinkhoff, Lone Gram, Wade H. Jeffrey, Rolf Daniel, and Meinhard Simon. "Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage​." ​Nature Microbiology ​1, no. 7 (2016): ​16063​. ​https://doi.org/10.1038/nmicrobiol.2016.63.
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  • 2016 | Journal Article
    ​ ​Röttig, Annika, Carl Simon Strittmatter, Jennifer Schauer, Sebastian Hiessl, Anja Poehlein, Rolf Daniel, and Alexander Steinbüchel. "Role of Wax Ester Synthase/Acyl Coenzyme A:Diacylglycerol Acyltransferase in Oleaginous Streptomyces sp. Strain G25​." ​Applied and Environmental Microbiology ​82, no. 19 (2016): ​5969​-5981​. ​https://doi.org/10.1128/AEM.01719-16.
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  • 2015 | Conference Abstract
    ​ ​Rybalka, Nataliya, Jens Boy, Heiko Nacke, Rolf Daniel, and Thomas Friedl. "MICROALGAE COMMUNITIES IN ANTARCTIC SOILS: CHANGES ALONG SOIL DEVELOPMENTAL STAGES AND TESTING FOR GEOGRAPHICAL DISTRIBUTION​." ​European Journal of Phycology ​50​ ​(2015): 
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  • 2015 | Journal Article
    ​ ​Schneider, Dominik, Andreas Reimer, Angelina Hahlbrock, Gernot Arp, and Rolf Daniel. "Metagenomic and Metatranscriptomic Analyses of Bacterial Communities Derived From a Calcifying Karst Water Creek Biofilm and Tufa​." ​Geomicrobiology Journal ​32, no. 3-4 (2015): ​316​-331​. ​https://doi.org/10.1080/01490451.2014.907376.
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  • 2015 | Journal Article
    ​ ​Voget, Sonja, Andreas Knapp, Anja Poehlein, Christel Vollstedt, Wolfgang J. Streit, Rolf Daniel, and Karl-Erich Jaeger. "Complete genome sequence of the lipase producing strain Burkholderia glumae PG1​." ​Journal of Biotechnology ​204 (2015): ​3​-4​. ​https://doi.org/10.1016/j.jbiotec.2015.03.022.
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  • 2015 | Journal Article | 
    ​ ​Poehlein, Anja, Rolf Daniel, and Diliana Dancheva Simeonova. "Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna​." ​Standards in Genomic Sciences ​10 (2015): ​100​. ​https://doi.org/10.1186/s40793-015-0086-x.
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  • 2015 | Journal Article
    ​ ​Wietz, Matthias, Bernd Wemheuer, Heike Simon, Helge-Ansgar Giebel, Maren A. Seibt, Rolf Daniel, Thorsten Brinkhoff, and Meinhard Simon. "Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans​." ​Environmental Microbiology ​17, no. 10 (2015): ​3822​-3831​. ​https://doi.org/10.1111/1462-2920.12842.
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  • 2015 | Journal Article | 
    ​ ​Herzog, Sarah, Franziska Wemheuer, Bernd Wemheuer, and Rolf Daniel. "Effects of Fertilization and Sampling Time on Composition and Diversity of Entire and Active Bacterial Communities in German Grassland Soils​." ​PLoS ONE ​10, no. 12 (2015): ​e0145575​. ​https://doi.org/10.1371/journal.pone.0145575.
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  • 2015 | Journal Article | 
    ​ ​Voget, Sonja, Bernd Wemheuer, Thorsten Brinkhoff, John Vollmers, Sascha Dietrich, Helge-Ansgar Giebel, Christine Beardsley et al. "Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses​." ​The ISME Journal ​9, no. 2 (2015): ​371​-384​. ​https://doi.org/10.1038/ismej.2014.134.
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  • 2015 | Journal Article | 
    ​ ​Aßhauer, Kathrin Petra, Bernd Wemheuer, Rolf Daniel, and Peter Meinicke. "Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data​." ​Bioinformatics ​31, no. 17 (2015): ​2882​-2884​. ​https://doi.org/10.1093/bioinformatics/btv287.
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  • 2015 | Journal Article | 
    ​ ​Wemheuer, Bernd, Franziska Wemheuer, Jacqueline Hollensteiner, Frauke-Dorothee Meyer, Sonja Voget, and Rolf Daniel. "The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches​." ​Frontiers in Microbiology ​6 (2015): ​805​. ​https://doi.org/10.3389/fmicb.2015.00805.
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  • 2014 | Conference Paper
    ​ ​Wietz, Matthias, Bernd Wemheuer, Heike Simon, Helge-Ansgar Giebel, Maren A. Seibt, Rolf Daniel, Maximilian Mitulla, Anna Maria Pfefferkorn, Thorsten Brinkhoff, and Meinhard Simon. "Community-level, physiological and genomic characterization of polysaccharide degradation by bacterioplankton from the Southern and Atlantic Oceans​." ​Paper presented at the Gordon Research Conference ‘Marine Microbes’ and ISME-15, ​Bentley, USA / Seoul, Korea, ​2014. https://doi.org/10.13140/2.1.4778.7527.
    ​Details  DOI 
  • 2014 | Journal Article | 
    ​ ​Ilmberger, Nele, Simon Güllert, Joana Dannenberg, Ulrich Rabausch, Jeremy Torres, Bernd Wemheuer, Malik Alawi et al. "A Comparative Metagenome Survey of the Fecal Microbiota of a Breast- and a Plant-Fed Asian Elephant Reveals an Unexpectedly High Diversity of Glycoside Hydrolase Family Enzymes​." ​PLoS One ​9, no. 9 (2014): ​e106707​. ​https://doi.org/10.1371/journal.pone.0106707.
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article
    ​ ​Wemheuer, Bernd, Simon Güllert, Sara Billerbeck, Helge-Ansgar Giebel, Sonja Voget, Meinhard Simon, and Rolf Daniel. "Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches​." ​FEMS Microbiology Ecology ​87, no. 2 (2014): ​378​-389​. ​https://doi.org/10.1111/1574-6941.12230.
    ​Details  DOI  PMID  PMC  WoS 
  • 2014 | Journal Article | 
    ​ ​Djukic, Marvin, Elzbieta B. Brzuszkiewicz, Anne Fünfhaus, Jörn Voss, Kathleen Gollnow, Lena Poppinga, Heiko Liesegang, Eva Garcia-Gonzalez, Elke Genersch, and Rolf Daniel. "How to Kill the Honey Bee Larva: Genomic Potential and Virulence Mechanisms of Paenibacillus larvae​." ​PLoS ONE ​9, no. 3 (2014): ​e90914​. ​https://doi.org/10.1371/journal.pone.0090914.
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | 
    ​ ​Hess, Verena, Anja Poehlein, Marie Charlotte Weghoff, Rolf Daniel, and Volker Müller. "A genome-guided analysis of energy conservation in the thermophilic, cytochrome-free acetogenic bacterium Thermoanaerobacter kivui​." ​BMC Genomics ​15 (2014): ​1139​. ​https://doi.org/10.1186/1471-2164-15-1139.
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article
    ​ ​Mientus, Markus, Silja Brady, Angel Angelov, Philipp Zimmermann, Bernd Wemheuer, Jörg Schuldes, Rolf Daniel, and Wolfgang Liebl. "Thermostable Xylanase and β-Glucanase Derived from the Metagenome of the Avachinsky Crater in Kamchatka (Russia)​." ​Current Biotechnology ​2, no. 4 (2013): ​284​-293​. ​https://doi.org/10.2174/2211550102999131128150257.
    ​Details  DOI 
  • 2013 | Journal Article
    ​ ​Cesarz, Simone, Ann-Catrin Fender, Friderike Beyer, Kerttu Valtanen, Birgit Pfeiffer, Dirk Gansert, Dietrich Hertel et al. "Roots from beech (Fagus sylvatica L.) and ash (Fraxinus excelsior L.) differentially affect soil microorganisms and carbon dynamics​." ​Soil Biology and Biochemistry ​61 (2013): ​23​-32​. ​https://doi.org/10.1016/j.soilbio.2013.02.003.
    ​Details  DOI 
  • 2013 | Journal Article | 
    ​ ​Wemheuer, Bernd, Robert Taube, Pinar Akyol, Franziska Wemheuer, and Rolf Daniel. "Microbial Diversity and Biochemical Potential Encoded by Thermal Spring Metagenomes Derived from the Kamchatka Peninsula​." ​Archaea (2013): ​136714​. ​https://doi.org/10.1155/2013/136714.
    ​Details  DOI  WoS 
  • 2013 | Journal Article
    ​ ​Blumenberg, Martin, Gernot Arp, Joachim Reitner, Dominik Schneider, Rolf Daniel, and Volker Thiel. "Bacteriohopanepolyols in a stratified cyanobacterial mat from Kiritimati (Christmas Island, Kiribati)​." ​Organic Geochemistry ​55 (2013): ​55​-62​. ​https://doi.org/10.1016/j.orggeochem.2012.11.004.
    ​Details  DOI  WoS 
  • 2013 | Journal Article
    ​ ​Sahm, Kerstin, Patrick John, Heiko Nacke, Bernd Wemheuer, Ralf Grote, Rolf Daniel, and Garabed Antranikian. "High abundance of heterotrophic prokaryotes in hydrothermal springs of the Azores as revealed by a network of 16S rRNA gene-based methods​." ​Extremophiles ​17, no. 4 (2013): ​649​-662​. ​https://doi.org/10.1007/s00792-013-0548-2.
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article
    ​ ​Krohn-Molt, Ines, Bernd Wemheuer, Malik Alawi, Anja Poehlein, Simon Guellert, Christel Schmeisser, Andreas Pommerening-Roeser et al. "Metagenome Survey of a Multispecies and Alga-Associated Biofilm Revealed Key Elements of Bacterial-Algal Interactions in Photobioreactors​." ​Applied and Environmental Microbiology ​79, no. 20 (2013): ​6196​-6206​. ​https://doi.org/10.1128/AEM.01641-13.
    ​Details  DOI  PMID  PMC  WoS 
  • 2013 | Journal Article | 
    ​ ​Schneider, Dominik, Gernot Arp, Andreas Reimer, Joachim Reitner, and Rolf Daniel. "Phylogenetic Analysis of a Microbialite-Forming Microbial Mat from a Hypersaline Lake of the Kiritimati Atoll, Central Pacific​." ​PLoS ONE ​8, no. 6 (2013): ​e66662​. ​https://doi.org/10.1371/journal.pone.0066662.
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article | 
    ​ ​Birkhofer, Klaus, Ingo Schöning, Fabian Alt, Nadine Herold, Bernhard Klarner, Mark Maraun, Sven Marhan et al. "General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types​." ​PLoS ONE ​7, no. 8 (2012): ​e43292​. ​https://doi.org/10.1371/journal.pone.0043292.
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Danielsen, Lara, A. Thürmer, P. Meinicke, Marc Buée, E. Morin, Francis Martin, Gilles Pilate, Rolf Daniel, Andrea Polle, and M. Reich. "Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities​." ​Ecology and Evolution ​2, no. 8 (2012): ​1935​-1948​. ​https://doi.org/10.1002/ece3.305.
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Wemheuer, Bernd, Franziska Wemheuer, and Rolf Daniel. "RNA-Based Assessment of Diversity and Composition of Active Archaeal Communities in the German Bight​." ​Archaea (2012): ​UNSP 695826​. ​https://doi.org/10.1155/2012/695826.
    ​Details  DOI  WoS 
  • 2012 | Journal Article
    ​ ​Djukic, Marvin, Dominik Becker, Anja Poehlein, Sonja Voget, and Rolf Daniel. "Genome Sequence of Paenibacillus alvei DSM 29, a Secondary Invader during European Foulbrood Outbreaks​." ​Journal of Bacteriology ​194, no. 22 (2012): . ​https://doi.org/10.1128/JB.01698-12.
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article
    ​ ​Brzuszkiewicz, Elzbieta B., Tanja Waschkowitz, Arnim Wiezer, and Rolf Daniel. "Complete Genome Sequence of the B-12-Producing Shimwellia blattae Strain DSM 4481, Isolated from a Cockroach​." ​Journal of Bacteriology ​194, no. 16 (2012): . ​https://doi.org/10.1128/JB.00829-12.
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article
    ​ ​Schuldes, Jörg, Mariita Rodriguez Orbegoso, Christel Schmeisser, Hari B. Krishnan, Rolf Daniel, and Wolfgang R. Streit. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257​." ​Journal of Bacteriology ​194, no. 16 (2012): . ​https://doi.org/10.1128/JB.00966-12.
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article
    ​ ​Voget, Sonja, Barbara Klippel, Rolf Daniel, and Garabed Antranikian. "Complete Genome Sequence of Carnobacterium sp 17-4​." ​Journal of Bacteriology ​193, no. 13 (2011): ​3403​-3404​. ​https://doi.org/10.1128/JB.05113-11.
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article
    ​ ​Poehlein, Anja, Bernhard Kusian, Baerbel Friedrich, Rolf Daniel, and Botho Bowien. "Complete Genome Sequence of the Type Strain Cupriavidus necator N-1​." ​Journal of Bacteriology ​193, no. 18 (2011): . ​https://doi.org/10.1128/JB.05660-11.
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article
    ​ ​Djukic, Marvin, Anja Poehlein, Andrea Thürmer, and Rolf Daniel. "Genome Sequence of Brevibacillus laterosporus LMG 15441, a Pathogen of Invertebrates​." ​Journal of Bacteriology ​193, no. 19 (2011): ​5535​-5536​. ​https://doi.org/10.1128/JB.05696-11.
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article
    ​ ​Volland, Sonja, Michael Rachinger, Axel W. Strittmatter, Rolf Daniel, Gerhard Gottschalk, and Ortwin Meyer. "Complete Genome Sequences of the Chemolithoautotrophic Oligotropha carboxidovorans Strains OM4 and OM5​." ​Journal of Bacteriology ​193, no. 18 (2011): . ​https://doi.org/10.1128/JB.05619-11.
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article
    ​ ​Schreiber, Fabian, Peter Gumrich, Rolf Daniel, and Peter Meinicke. "Treephyler: fast taxonomic profiling of metagenomes​." ​Bioinformatics ​26, no. 7 (2010): ​960​-961​. ​https://doi.org/10.1093/bioinformatics/btq070.
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article
    ​ ​Angelov, Angel, Susanne Liebl, Meike Ballschmiter, Mechthild Boemeke, Ruediger Lehmann, Heiko Liesegang, Rolf Daniel, and Wolfgang Liebl. "Genome Sequence of the Polysaccharide-Degrading, Thermophilic Anaerobe Spirochaeta thermophila DSM 6192​." ​Journal of Bacteriology ​192, no. 24 (2010): ​6492​-6493​. ​https://doi.org/10.1128/JB.01023-10.
    ​Details  DOI  PMID  PMC  WoS 
  • 2009 | Journal Article
    ​ ​Simon, Carola, Judith Herath, Stephanie Rockstroh, and Rolf Daniel. "Rapid Identification of Genes Encoding DNA Polymerases by Function-Based Screening of Metagenomic Libraries Derived from Glacial Ice​." ​Applied and Environmental Microbiology ​75, no. 9 (2009): ​2964​-2968​. ​https://doi.org/10.1128/AEM.02644-08.
    ​Details  DOI  PMID  PMC  WoS 
  • 1996 | Journal Article
    ​ ​Seyfried, M., Rolf Daniel, and Gerhard Gottschalk. "Cloning, sequencing, and overexpression of the genes encoding coenzyme B12-dependent glycerol dehydratase of Citrobacter freundii​." ​Journal of Bacteriology ​178, no. 19 (1996): ​5793​-5796​. ​https://doi.org/10.1128/JB.178.19.5793-5796.1996.
    ​Details  DOI 
  • 1992 | Journal Article
    ​ ​Daniel, Rolf, and Gerhard Gottschalk. "Growth temperature-dependent activity of glycerol dehydratase in Escherichia coli expressing the Citrobacter freundii dha regulon​." ​FEMS Microbiology Letters ​100, no. 1-3 (1992): ​281​-285​. ​https://doi.org/10.1111/j.1574-6968.1992.tb14053.x.
    ​Details  DOI  PMID  PMC 

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