PLoS Computational Biology

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  • 2024 | Journal Article
    ​ ​Unsupervised learning of perceptual feature combinations​
    Tamosiunaite, M.; Tetzlaff, C. & Wörgötter, F.​ (2024) 
    PLoS Computational Biology, 20(3) art. e1011926​.​ DOI: https://doi.org/10.1371/journal.pcbi.1011926 
    ​Details  DOI 
  • 2024 | Journal Article
    ​ ​Decomposing bulk signals to reveal hidden information in processive enzyme reactions: A case study in mRNA translation​
    Haase, N.; Holtkamp, W.; Christ, S.; Heinemann, D.; Rodnina, M. V. & Rudorf, S.​ (2024) 
    PLoS Computational Biology, 20(3) art. e1011918​.​ DOI: https://doi.org/10.1371/journal.pcbi.1011918 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Information theoretic evidence for layer- and frequency-specific changes in cortical information processing under anesthesia​
    Pinzuti, E.; Wollstadt, P.; Tüscher, O. & Wibral, M.​ (2023) 
    PLoS Computational Biology, 19(1) art. e1010380​.​ DOI: https://doi.org/10.1371/journal.pcbi.1010380 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Information-theoretic analyses of neural data to minimize the effect of researchers’ assumptions in predictive coding studies​
    Wollstadt, P.; Rathbun, D. L.; Usrey, W. M.; Bastos, A. M.; Lindner, M.; Priesemann, V. & Wibral, M.​ (2023) 
    PLoS Computational Biology, 19(11) art. e1011567​.​ DOI: https://doi.org/10.1371/journal.pcbi.1011567 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Dissolution of spiral wave’s core using cardiac optogenetics​
    Hussaini, S.; Lädke, S. L.; Schröder-Schetelig, J.; Venkatesan, V.; Quiñonez Uribe, R. A.; Richter, C. & Majumder, R. et al.​ (2023) 
    PLoS Computational Biology, 19(12) art. e1011660​.​ DOI: https://doi.org/10.1371/journal.pcbi.1011660 
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  • 2022 | Journal Article | 
    ​ ​Comparing human and model-based forecasts of COVID-19 in Germany and Poland​
    Bosse, N. I.; Abbott, S.; Bracher, J.; Hain, H.; Quilty, B. J.; Jit, M. & van Leeuwen, E. et al.​ (2022) 
    PLoS Computational Biology, 18(9) art. e1010405​.​ DOI: https://doi.org/10.1371/journal.pcbi.1010405 
    ​Details  DOI 
  • 2022 | Journal Article
    ​ ​Sampling effects and measurement overlap can bias the inference of neuronal avalanches​
    Pinheiro Neto, J.; Spitzner, F. P. & Priesemann, V. ​ (2022) 
    PLOS Computational Biology, 18(11) art. e1010678​.​ DOI: https://doi.org/10.1371/journal.pcbi.1010678 
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Simple model for encoding natural images by retinal ganglion cells with nonlinear spatial integration​
    Liu, J. K. ; Karamanlis, D. & Gollisch, T. ​ (2022) 
    PLOS Computational Biology, 18(3) pp. e1009925​.​ DOI: https://doi.org/10.1371/journal.pcbi.1009925 
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  • 2022 | Journal Article | Research Paper | 
    ​ ​Ultrafast population coding and axo-somatic compartmentalization​
    Zhang, C.; Hofmann, D.; Neef, A.   & Wolf, F. ​ (2022) 
    PLoS Computational Biology, 18(1) pp. e1009775​.​ DOI: https://doi.org/10.1371/journal.pcbi.1009775 
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  • 2022 | Journal Article | 
    ​ ​Insertions and deletions as phylogenetic signal in an alignment-free context​
    Birth, N.; Dencker, T. & Morgenstern, B. ​ (2022) 
    PLOS Computational Biology, 18(8) pp. e1010303​.​ DOI: https://doi.org/10.1371/journal.pcbi.1010303 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Embedding optimization reveals long-lasting history dependence in neural spiking activity​
    Rudelt, L.; González Marx, D.; Wibral, M.   & Priesemann, V. ​ (2021) 
    PLoS Computational Biology, 17(6) pp. e1008927​.​ DOI: https://doi.org/10.1371/journal.pcbi.1008927 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Relaxing restrictions at the pace of vaccination increases freedom and guards against further COVID-19 waves​
    Bauer, S.; Contreras, S.; Dehning, J.; Linden, M.; Iftekhar, E.; Mohr, S. B. & Olivera-Nappa, A. et al.​ (2021) 
    PLOS Computational Biology, 17(9) pp. e1009288​.​ DOI: https://doi.org/10.1371/journal.pcbi.1009288 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Assessing criticality in pre-seizure single-neuron activity of human epileptic cortex​
    Hagemann, A.; Wilting, J.; Samimizad, B.; Mormann, F. & Priesemann, V. ​ (2021) 
    PLOS Computational Biology, 17(3) pp. e1008773​.​ DOI: https://doi.org/10.1371/journal.pcbi.1008773 
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  • 2021 | Journal Article | Research Paper | 
    ​ ​The biophysical basis underlying the maintenance of early phase long-term potentiation​
    Becker, M. F. P. & Tetzlaff, C.​ (2021) 
    PLoS Computational Biology, 17(3) pp. e1008813​.​ DOI: https://doi.org/10.1371/journal.pcbi.1008813 
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  • 2021 | Journal Article | Research Paper | 
    ​ ​Learning divisive normalization in primary visual cortex​
    Burg, M. F.; Cadena, S. A.; Denfield, G. H.; Walker, E. Y.; Tolias, A. S.; Bethge, M. & Ecker, A. S. ​ (2021) 
    PLoS Computational Biology, 17(6) pp. e1009028​.​ DOI: https://doi.org/10.1371/journal.pcbi.1009028 
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  • 2021 | Journal Article | Research Paper | 
    ​ ​Pulsed low-energy stimulation initiates electric turbulence in cardiac tissue​
    Majumder, R.; Hussaini, S.; Zykov, V. S.; Luther, S.   & Bodenschatz, E. ​ (2021) 
    PLOS Computational Biology, 17(10) pp. e1009476​.​ DOI: https://doi.org/10.1371/journal.pcbi.1009476 
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  • 2020 | Journal Article
    ​ ​Microtubule instability driven by longitudinal and lateral strain propagation​
    Igaev, M. & Grubmüller, H. ​ (2020) 
    PLoS Computational Biology, 16(9) pp. e1008132​.​ DOI: https://doi.org/10.1371/journal.pcbi.1008132 
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  • 2020 | Journal Article
    ​ ​Measuring spectrally-resolved information transfer​
    Pinzuti, E.; Wollstadt, P.; Gutknecht, A.; Tüscher, O. & Wibral, M. ​ (2020) 
    PLoS Computational Biology, 16(12) pp. e1008526​.​ DOI: https://doi.org/10.1371/journal.pcbi.1008526 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Classifying sex and strain from mouse ultrasonic vocalizations using deep learning​
    Ivanenko, A.; Watkins, P.; van Gerven, M. A. J.; Hammerschmidt, K. & Englitz, B.​ (2020) 
    PLoS Computational Biology, 16(6) art. e1007918​.​ DOI: https://doi.org/10.1371/journal.pcbi.1007918 
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  • 2020 | Journal Article | Research Paper | 
    ​ ​Emergence and suppression of cooperation by action visibility in transparent games​
    Unakafov, A. M.; Schultze, T. ; Gail, A. ; Moeller, S.; Kagan, I.; Eule, S. & Wolf, F. ​ (2020) 
    PLoS Computational Biology, 16(1) art. e1007588​.​ DOI: https://doi.org/10.1371/journal.pcbi.1007588 
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  • 2020 | Journal Article | Research Paper | 
    ​ ​Reliable estimation of membrane curvature for cryo-electron tomography​
    Salfer, M.; Collado, J. F.; Baumeister, W.; Fernández Busnadiego, R.   & Martínez-Sánchez, A.​ (2020) 
    PLoS Computational Biology, 16(8) pp. e1007962​.​ DOI: https://doi.org/10.1371/journal.pcbi.1007962 
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  • 2019 | Journal Article | 
    ​ ​Chemotaxis in external fields: Simulations for active magnetic biological matter​
    Codutti, A.; Bente, K.; Faivre, D. & Klumpp, S. ​ (2019) 
    PLoS Computational Biology, 15(12) pp. e1007548​.​ DOI: https://doi.org/10.1371/journal.pcbi.1007548 
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​Deep convolutional models improve predictions of macaque V1 responses to natural images​
    Cadena, S. A.; Denfield, G. H.; Walker, E. Y.; Gatys, L. A.; Tolias, A. S.; Bethge, M. & Ecker, A. S. ​ (2019) 
    PLoS Computational Biology, 15(4) art. e1006897​.​ DOI: https://doi.org/10.1371/journal.pcbi.1006897 
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  • 2018 | Journal Article
    ​ ​Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction​
    Vorberg, S.; Seemayer, S. & Söding, J. ​ (2018) 
    PLOS Computational Biology, 14(11) pp. e1006526​.​ DOI: https://doi.org/10.1371/journal.pcbi.1006526 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Bridging structure and function: A model of sequence learning and prediction in primary visual cortex​
    Klos, C.; Miner, D. & Triesch, J.​ (2018) 
    PLoS Computational Biology, 14(6) pp. e1006187​.​ DOI: https://doi.org/10.1371/journal.pcbi.1006187 
    ​Details  DOI 
  • 2018 | Journal Article | Research Paper | 
    ​ ​Can a time varying external drive give rise to apparent criticality in neural systems?​
    Priesemann, V.   & Shriki, O.​ (2018) 
    PLoS Computational Biology, 14(5) art. e1006081​.​ DOI: https://doi.org/10.1371/journal.pcbi.1006081 
    ​Details  DOI 
  • 2017 | Journal Article | 
    ​ ​Bayesian refinement of protein structures and ensembles against SAXS data using molecular dynamics.​
    Shevchuk, R. & Hub, J. S.​ (2017) 
    PLoS Computational Biology, 13(10) art. e1005800​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005800 
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  • 2017 | Journal Article | 
    ​ ​Breakdown of local information processing may underlie isoflurane anesthesia effects.​
    Wollstadt, P.; Sellers, K. K.; Rudelt, L.; Priesemann, V. ; Hutt, A.; Frohlich, F. & Wibral, M. ​ (2017) 
    PLoS Computational Biology, 13(6) art. e1005511​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005511 
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  • 2017 | Journal Article
    ​ ​Inferring repeat-protein energetics from evolutionary information​
    Espada, R.; Parra, R. G.; Mora, T.; Walczak, A. M. & Ferreiro, D. U.​ (2017) 
    PLoS Computational Biology, 13(6) pp. e1005584​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005584 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Inferring the Chemotactic Strategy of P. putida and E. coli Using Modified Kramers-Moyal Coefficients​
    Pohl, O.; Hintsche, M.; Alirezaeizanjani, Z.; Seyrich, M.; Beta, C. & Stark, H. ​ (2017) 
    PLOS Computational Biology, 13(1) pp. e1005329​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005329 
    ​Details  DOI 
  • 2016 | Journal Article | 
    ​ ​An Extended Normalization Model of Attention Accounts for Feature-Based Attentional Enhancement of Both Response and Coherence Gain​
    Schwedhelm, P. ; Krishna, B. S.   & Treue, S. ​ (2016) 
    PLOS Computational Biology, 12(12) art. e1005225​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005225 
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  • 2016 | Journal Article | 
    ​ ​Neural Population Dynamics during Reaching Are Better Explained by a Dynamical System than Representational Tuning​
    Michaels, J. A. ; Dann, B.   & Scherberger, H. ​ (2016) 
    PLOS Computational Biology, 12(11) art. e1005175​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005175 
    ​Details  DOI 
  • 2016 | Journal Article | 
    ​ ​rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison​
    Hahn, L.; Leimeister, C.-A.; Ounit, R.; Lonardi, S. & Morgenstern, B. ​ (2016) 
    PLoS Computational Biology, 12(10) art. e1005107​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005107 
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  • 2016 | Journal Article | 
    ​ ​Using Matrix and Tensor Factorizations for the Single-Trial Analysis of Population Spike Trains​
    Onken, A.; Liu, J. K. ; Karunasekara, P. P. C. R.; Delis, I.; Gollisch, T.   & Panzeri, S.​ (2016) 
    PLoS Computational Biology, 12(11) art. e1005189​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005189 
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  • 2016 | Journal Article | 
    ​ ​Inferential Structure Determination of Chromosomes from Single-Cell Hi-C Data​
    Carstens, S.; Nilges, M. & Habeck, M. ​ (2016) 
    PLoS Computational Biology, 12(12) art. e1005292​.​ DOI: https://doi.org/10.1371/journal.pcbi.1005292 
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  • 2015 | Journal Article | 
    ​ ​Self-organization in Balanced State Networks by STDP and Homeostatic Plasticity.​
    Effenberger, F.; Jost, J. & Levina, A.​ (2015) 
    PLoS Computational Biology, 11(9) art. e1004420​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004420 
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  • 2015 | Journal Article
    ​ ​Simulating the Complex Cell Design of Trypanosoma brucei and Its Motility​
    Alizadehrad, D.; Krüger, T.; Engstler, M. & Stark, H. ​ (2015) 
    PLoS Computational Biology, 11(1) pp. e1003967​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003967 
    ​Details  DOI 
  • 2015 | Journal Article
    ​ ​Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling​
    Meier, A. & Söding, J. ​ (2015) 
    PLOS Computational Biology, 11(10) pp. e1004343​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004343 
    ​Details  DOI 
  • 2015 | Journal Article | 
    ​ ​Complete Firing-Rate Response of Neurons with Complex Intrinsic Dynamics​
    Puelma Touzel, M. & Wolf, F. ​ (2015) 
    PLOS Computational Biology, 11(12) art. e1004636​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004636 
    ​Details  DOI 
  • 2015 | Journal Article | 
    ​ ​When Less Is More: Non-monotonic Spike Sequence Processing in Neurons​
    Arnoldt, H.; Chang, S.; Jahnke, S.; Urmersbach, B.; Taschenberger, H. & Timme, M.​ (2015) 
    PLoS Computational Biology, 11(2) art. UNSP e1004002​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004002 
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  • 2015 | Journal Article | 
    ​ ​Spike-Triggered Covariance Analysis Reveals Phenomenological Diversity of Contrast Adaptation in the Retina​
    Liu, J. K.   & Gollisch, T. ​ (2015) 
    PLoS Computational Biology, 11(7) art. e1004425​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004425 
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  • 2015 | Journal Article | 
    ​ ​Formation and Maintenance of Robust Long-Term Information Storage in the Presence of Synaptic Turnover​
    Fauth, M. ; Woergoetter, F. & Tetzlaff, C.​ (2015) 
    PLoS Computational Biology, 11(12) art. e1004684​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004684 
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  • 2015 | Journal Article | Research Paper | 
    ​ ​On the Adjacency Matrix of RyR2 Cluster Structures​
    Walker, M. A.; Kohl, T. ; Lehnart, S. E. ; Greenstein, J. L.; Lederer, W. J. & Winslow, R. L.​ (2015) 
    PLOS Computational Biology, 11(11) art. e1004521​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004521 
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  • 2015 | Journal Article | 
    ​ ​The Formation of Multi-synaptic Connections by the Interaction of Synaptic and Structural Plasticity and Their Functional Consequences​
    Fauth, M.; Woergoetter, F. & Tetzlaff, C.​ (2015) 
    PLoS Computational Biology, 11(1) art. e1004031​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004031 
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  • 2015 | Journal Article | 
    ​ ​Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex​
    Schottdorf, M. ; Keil, W. ; Coppola, D.; White, L. E. & Wolf, F. ​ (2015) 
    PLOS Computational Biology, 11(11) art. e1004602​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004602 
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  • 2015 | Journal Article
    ​ ​Improved Estimation and Interpretation of Correlations in Neural Circuits​
    Yatsenko, D.; Josić, K.; Ecker, A. S. ; Froudarakis, E.; Cotton, R. J. & Tolias, A. S.​ (2015) 
    PLoS Computational Biology, 11(3) art. e1004083​.​ DOI: https://doi.org/10.1371/journal.pcbi.1004083 
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  • 2014 | Journal Article | 
    ​ ​Leadership in Moving Human Groups​
    Boos, M. ; Pritz, J. ; Lange, S.   & Belz, M. ​ (2014) 
    PLOS Computational Biology, 10(4) art. e1003541​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003541 
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  • 2014 | Journal Article | 
    ​ ​Oscillation-Induced Signal Transmission and Gating in Neural Circuits​
    Jahnke, S.; Memmesheimer, R.-M. & Timme, M.​ (2014) 
    PLoS Computational Biology, 10(12) art. e1003940​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003940 
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  • 2014 | Journal Article | Research Paper
    ​ ​Deducing the Kinetics of Protein Synthesis In Vivo from the Transition Rates Measured In Vitro​
    Rudorf, S.; Thommen, M. ; Rodnina, M. V.   & Lipowsky, R.​ (2014) 
    PLOS Computational Biology, 10(10) art. e1003909​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003909 
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  • 2013 | Journal Article | Research Paper
    ​ ​Neuronal Avalanches Differ from Wakefulness to Deep Sleep – Evidence from Intracranial Depth Recordings in Humans​
    Priesemann, V. ; Valderrama, M.; Wibral, M.   & Le Van Quyen, M.​ (2013) 
    PLoS Computational Biology, 9(3) pp. e1002985​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002985 
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  • 2013 | Journal Article
    ​ ​Collective Dynamics Underlying Allosteric Transitions in Hemoglobin​
    Vesper, M. D. & de Groot, B. L. ​ (2013) 
    PLoS Computational Biology, 9(9) pp. e1003232​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003232 
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  • 2013 | Journal Article
    ​ ​Probing the Energy Landscape of Activation Gating of the Bacterial Potassium Channel KcsA​
    Linder, T.; de Groot, B. L.   & Stary-Weinzinger, A.​ (2013) 
    PLoS Computational Biology, 9(5) pp. e1003058​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003058 
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  • 2013 | Journal Article | 
    ​ ​Distribution of the Fittest Individuals and the Rate of Muller's Ratchet in a Model with Overlapping Generations​
    Metzger, J. J. & Eule, S.​ (2013) 
    PLoS Computational Biology, 9(11) art. e1003303​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003303 
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  • 2013 | Journal Article | 
    ​ ​A Discriminative Approach for Unsupervised Clustering of DNA Sequence Motifs​
    Stegmaier, P.; Kel, A. E.; Wingender, E. & Borlak, J.​ (2013) 
    PLoS Computational Biology, 9(3) art. e1002958​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002958 
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  • 2013 | Journal Article | Research Paper
    ​ ​Temporal adaptation enhances efficient contrast gain control on natural images​
    Sinz, F.   & Bethge, M.​ (2013) 
    PLoS Computational Biology, 9(1) art. e1002889​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002889 
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  • 2013 | Journal Article | 
    ​ ​Synaptic Scaling Enables Dynamically Distinct Short- and Long-Term Memory Formation​
    Tetzlaff, C.; Kolodziejski, C.; Timme, M.; Tsodyks, M. & Woergoetter, F.​ (2013) 
    PLoS Computational Biology, 9(10) art. e1003307​.​ DOI: https://doi.org/10.1371/journal.pcbi.1003307 
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  • 2012 | Journal Article
    ​ ​Ubiquitin Dynamics in Complexes Reveal Molecular Recognition Mechanisms Beyond Induced Fit and Conformational Selection​
    Peters, J. H. & de Groot, B. L. ​ (2012) 
    PLoS Computational Biology, 8(10) pp. e1002704​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002704 
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  • 2012 | Journal Article | 
    ​ ​Dynamic Effective Connectivity of Inter-Areal Brain Circuits​
    Battaglia, D. ; Witt, A. ; Wolf, F.   & Geisel, T. ​ (2012) 
    PLoS Computational Biology, 8(3) art. e1002438​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002438 
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  • 2012 | Journal Article | 
    ​ ​Non-Additive Coupling Enables Propagation of Synchronous Spiking Activity in Purely Random Networks​
    Memmesheimer, R.-M. & Timme, M.​ (2012) 
    PLoS Computational Biology, 8(4) art. e1002384​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002384 
    ​Details  DOI 
  • 2012 | Journal Article | 
    ​ ​Coordinated Optimization of Visual Cortical Maps (II) Numerical Studies​
    Reichl, L. ; Heide, D.; Löwel, S. ; Crowley, J. C.; Kaschube, M.   & Wolf, F. ​ (2012) 
    PLoS Computational Biology, 8(11) art. e1002756​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002756 
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  • 2012 | Journal Article | 
    ​ ​Coordinated Optimization of Visual Cortical Maps (I) Symmetry-based Analysis​
    Reichl, L. ; Heide, D.; Löwel, S. ; Crowley, J. C.; Kaschube, M.   & Wolf, F. ​ (2012) 
    PLoS Computational Biology, 8(11) art. e1002466​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002466 
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  • 2012 | Journal Article | 
    ​ ​Sensorimotor Learning Biases Choice Behavior: A Learning Neural Field Model for Decision Making​
    Klaes, C. ; Schneegans, S.; Schöner, G. & Gail, A. ​ (2012) 
    PLoS Computational Biology, 8(11) art. e1002774​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002774 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | 
    ​ ​Model-Free Reconstruction of Excitatory Neuronal Connectivity from Calcium Imaging Signals​
    Stetter, O.; Battaglia, D.; Soriano, J. & Geisel, T.​ (2012) 
    PLoS Computational Biology, 8(8) art. e1002653​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002653 
    ​Details  DOI  PMID  PMC  WoS 
  • 2012 | Journal Article | Research Paper
    ​ ​MC EMiNEM Maps the Interaction Landscape of the Mediator​
    Niederberger, T.; Etzold, S.; Lidschreiber, M.; Maier, K. C.; Martin, D. E.; Froehlich, H. & Cramer, P.  et al.​ (2012) 
    PLOS Computational Biology, 8(6) art. e1002568​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002568 
    ​Details  DOI  PMID  PMC  WoS 
  • 2011 | Journal Article | 
    ​ ​Barriers to Diffusion in Dendrites and Estimation of Calcium Spread Following Synaptic Inputs​
    Biess, A.; Korkotian, E. & Holcman, D.​ (2011) 
    PLoS Computational Biology, 7(10) art. e1002182​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002182 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | 
    ​ ​Synchronous chaos and broad band gamma rhythm in a minimal multi-layer model of primary visual cortex.​
    Battaglia, D.   & Hansel, D.​ (2011) 
    PLoS Computational Biology, 7(10) art. e1002176​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002176 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | 
    ​ ​Representation of Dynamical Stimuli in Populations of Threshold Neurons​
    Tchumatchenko, T.   & Wolf, F. ​ (2011) 
    PLOS Computational Biology, 7(10) art. e1002239​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002239 
    ​Details  DOI 
  • 2011 | Journal Article | 
    ​ ​Impact of Microscopic Motility on the Swimming Behavior of Parasites: Straighter Trypanosomes are More Directional​
    Uppaluri, S.; Nagler, J. ; Stellamanns, E.; Heddergott, N.; Herminghaus, S. ; Engstler, M. & Pfohl, T.​ (2011) 
    PLoS Computational Biology, 7(6) art. e1002058​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002058 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | 
    ​ ​Local Orientation and the Evolution of Foraging: Changes in Decision Making Can Eliminate Evolutionary Trade-offs​
    van der Post, D. J. & Semmann, D.​ (2011) 
    PLoS Computational Biology, 7(10) art. e1002186​.​ DOI: https://doi.org/10.1371/journal.pcbi.1002186 
    ​Details  DOI  PMID  PMC  WoS 
  • 2010 | Journal Article
    ​ ​Spontaneous Quaternary and Tertiary T-R Transitions of Human Hemoglobin in Molecular Dynamics Simulation​
    Hub, J. S. ; Kubitzki, M. B. & de Groot, B. L. ​ (2010) 
    PLoS Computational Biology, 6(5) pp. e1000774​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000774 
    ​Details  DOI 
  • 2010 | Journal Article
    ​ ​Conformational Transitions upon Ligand Binding: Holo-Structure Prediction from Apo Conformations​
    Seeliger, D. & de Groot, B. L. ​ (2010) 
    PLoS Computational Biology, 6(1) pp. e1000634​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000634 
    ​Details  DOI 
  • 2010 | Journal Article | 
    ​ ​Self-Organized Criticality in Developing Neuronal Networks​
    Tetzlaff, C.; Okujeni, S.; Egert, U.; Woergoetter, F. & Butz, M.​ (2010) 
    PLoS Computational Biology, 6(12) art. e1001013​.​ DOI: https://doi.org/10.1371/journal.pcbi.1001013 
    ​Details  DOI  PMID  PMC  WoS 
  • 2009 | Journal Article | Research Paper
    ​ ​Natural image coding in V1: how much use is orientation selectivity?​
    Eichhorn, J.; Sinz, F.   & Bethge, M.​ (2009) 
    PLoS Computational Biology, 5(4) art. e1000336​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000336 
    ​Details  DOI  PMID  PMC  arXiv 
  • 2009 | Journal Article
    ​ ​Detection of Functional Modes in Protein Dynamics​
    Hub, J. S.   & de Groot, B. L. ​ (2009) 
    PLoS Computational Biology, 5(8) pp. e1000480​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000480 
    ​Details  DOI 
  • 2009 | Journal Article | Research Paper
    ​ ​A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family​
    Friedland, G. D.; Lakomek, N.-A. ; Griesinger, C. ; Meiler, J. & Kortemme, T.​ (2009) 
    PLOS Computational Biology, 5(5) art. e1000393​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000393 
    ​Details  DOI  PMID  PMC  WoS 
  • 2008 | Journal Article
    ​ ​Polar or apolar - the role of polarity for urea-induced protein denaturation​
    Stumpe, M. C. & Grubmüller, H. ​ (2008) 
    PLoS Computational Biology, 4(11) art. e1000221​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000221 
    ​Details  DOI  PMID  PMC 
  • 2008 | Journal Article
    ​ ​Chromophore protonation state controls photoswitching of the fluoroprotein asFP595​
    Schäfer, L. ; Groenhof, G. ; Boggio-Pasqua, M.; Robb, M. & Grubmüller, H. ​ (2008) 
    PLoS Computational Biology, 4(3) art. e1000034​.​ DOI: https://doi.org/10.1371/journal.pcbi.1000034 
    ​Details  DOI  PMID  PMC 
  • 2007 | Journal Article | 
    ​ ​Adaptive, fast walking in a biped robot under neuronal control and learning​
    Manoonpong, P.; Geng, T.; Kulvicius, T.; Porr, B. & Woergoetter, F.​ (2007) 
    PLoS Computational Biology, 3(7) art. e134​.​ DOI: https://doi.org/10.1371/journal.pcbi.0030134 
    ​Details  DOI  PMID  PMC  WoS 

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