Prof. Dr. Niels Grabe

Name Card

Staff Status
unigoe
 

1-84 of 84
 
The bibliographical data in your publication list are complete
You can correct existing data in the blue highlighted fields.To do this, please click on the coloured field. It is not possible to delete data here.
Fields that are not marked in colour (e. g. the authors) can be edited using the input form. To do so, click on the in front of the respective publication.
The bibliographic data in your publication list may be incomplete. You can
  • add any missing data in the fields marked in red or
  • correct existing data in the blue highlighted fields.
To do this, please click on the coloured field. It is not possible to delete data here.
Fields that are not marked in colour (e. g. the authors) can be edited using the input form. To do so, click on the in front of the respective publication.
Check/Uncheck all
  • 2023 | Book Chapter
    ​ ​Reusing Biomedical Data as Agreed – Towards Structured Metadata for Data Use Agreements​
    Bönisch, C.; Hanß, S.; Spicher, N. ; Sax, U.  & Krefting, D. ​ (2023)
    In:​Röhrig, Rainer; Grabe, Niels; Haag, Martin; Hübner, Ursula; Sax, Ulrich; Schmidt, Carsten Oliver; Sedlmayr, Martin, et al.​ (Eds.), German Medical Data Sciences 2023 – Science. Close to People. : Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. ​IOS Press. DOI: https://doi.org/10.3233/SHTI230690 
    ​Details  DOI 
  • 2019 | Journal Article | Research Paper
    ​ ​Cytotoxic T Cells and their Activation Status are Independent Prognostic Markers in Meningiomas​
    Rapp, C.; Dettling, S.; Liu, F.; Ull, A. T.; Warta, R.; Jungk, C. & Roesch, S. et al.​ (2019) 
    Clinical Cancer Research, 25(17) pp. 5260​-5270​.​ DOI: https://doi.org/10.1158/1078-0432.CCR-19-0389 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | Research Paper
    ​ ​Robust and accurate quantification of biomarkers of immune cells in lung cancer micro-environment using deep convolutional neural networks​
    Aprupe, L.; Litjens, G.; Brinker, T. J.; van der Laak, J. & Grabe, N. ​ (2019) 
    PeerJ, 7 art. e6335​.​ DOI: https://doi.org/10.7717/peerj.6335 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article
    ​ ​Identification and regulation of the long non-coding RNA Heat2 in heart failure​
    Boeckel, J.-N.; Perret, M. F.; Glaser, S. F.; Seeger, T.; Heumüller, A. W.; Chen, W. & John, D. et al.​ (2019) 
    Journal of Molecular and Cellular Cardiology, 126 pp. 13​-22​.​ DOI: https://doi.org/10.1016/j.yjmcc.2018.11.004 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Digitale Pathologie in der Immunonkologie – Aktuelle Chancen und Herausforderungen: ​Überblick zur Analyse von Immunzellinfiltraten mittels Whole Slide Imaging​
    Grabe, N. ; Roth, W. & Foersch, S.​ (2018) 
    Der Pathologe, 39(6) pp. 539​-545​.​ DOI: https://doi.org/10.1007/s00292-018-0540-9 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Altered density, composition and microanatomical distribution of infiltrating immune cells in cutaneous squamous cell carcinoma of organ transplant recipients​
    Strobel, S. B.; Safferling, K.; Lahrmann, B.; Hoffmann, J. H.; Enk, A. H.; Hadaschik, E. N. & Grabe, N.  et al.​ (2018) 
    British Journal of Dermatology, 179(2) pp. 405​-412​.​ DOI: https://doi.org/10.1111/bjd.16477 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Skin Cancer Classification Using Convolutional Neural Networks: Systematic Review​
    Brinker, T. J.; Hekler, A.; Utikal, J. S.; Grabe, N. ; Schadendorf, D.; Klode, J. & Berking, C. et al.​ (2018) 
    Journal of Medical Internet Research, 20(10) art. e11936​.​ DOI: https://doi.org/10.2196/11936 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​High numbers of PDCD1 (PD-1)-positive T cells and B2M mutations in microsatellite-unstable colorectal cancer​
    Janikovits, J.; Müller, M.; Krzykalla, J.; Körner, S.; Echterdiek, F.; Lahrmann, B. & Grabe, N.  et al.​ (2018) 
    OncoImmunology, 7(2) art. e1390640​.​ DOI: https://doi.org/10.1080/2162402X.2017.1390640 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Tumor Cell Load and Heterogeneity Estimation From Diffusion-Weighted MRI Calibrated With Histological Data: an Example From Lung Cancer​
    Yin, Y.; Sedlaczek, O.; Muller, B.; Warth, A.; Gonzalez-Vallinas, M.; Lahrmann, B. & Grabe, N.  et al.​ (2018) 
    IEEE Transactions on Medical Imaging, 37(1) pp. 35​-46​.​ DOI: https://doi.org/10.1109/TMI.2017.2698525 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Identification of CRKII, CFL1, CNTN1, NME2, and TKT as Novel and Frequent T-Cell Targets in Human IDH-Mutant Glioma​
    Dettling, S.; Stamova, S.; Warta, R.; Schnölzer, M.; Rapp, C.; Rathinasamy, A. & Reuss, D. et al.​ (2018) 
    Clinical Cancer Research, 24(12) pp. 2951​-2962​.​ DOI: https://doi.org/10.1158/1078-0432.CCR-17-1839 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Teledermatology: Comparison of Store-and-Forward Versus Live Interactive Video Conferencing​
    Brinker, T. J.; Hekler, A.; von Kalle, C.; Schadendorf, D.; Esser, S.; Berking, C. & Zacher, M. T. et al.​ (2018) 
    Journal of Medical Internet Research, 20(10) art. e11871​.​ DOI: https://doi.org/10.2196/11871 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Comparison of the Reverse-Remodeling Effect of Pharmacological Soluble Guanylate Cyclase Activation With Pressure Unloading in Pathological Myocardial Left Ventricular Hypertrophy​
    Ruppert, M.; Korkmaz-Icöz, S.; Li, S.; Brlecic, P.; Németh, B. T.; Oláh, A. & Horváth, E. M. et al.​ (2018) 
    Frontiers in Physiology, 9 art. 1869​.​ DOI: https://doi.org/10.3389/fphys.2018.01869 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Cortactin expression: Association with disease progression and survival in oral squamous cell carcinoma​
    Horn, D.; Gross, M.; Dyckhoff, G.; Fuchs, J.; Grabe, N. ; Weichert, W. & Herpel, E. et al.​ (2018) 
    Head & Neck, 40(12) pp. 2685​-2694​.​ DOI: https://doi.org/10.1002/hed.25515 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article | Research Paper
    ​ ​Astrocytic glutamine synthetase is expressed in the neuronal somatic layers and down-regulated proportionally to neuronal loss in the human epileptic hippocampus​
    Papageorgiou, I. E.; Valous, N. A.; Lahrmann, B.; Janova, H.; Klaft, Z.-J.; Koch, A. & Schneider, U. C et al.​ (2018) 
    Glia, 66(5) pp. 920​-933​.​ DOI: https://doi.org/10.1002/glia.23292 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | Research Paper
    ​ ​MAGE expression in head and neck squamous cell carcinoma primary tumors, lymph node metastases and respective recurrences-implications for immunotherapy​
    Laban, S.; Giebel, G.; Klümper, N.; Schröck, A.; Doescher, J.; Spagnoli, G. & Thierauf, J. et al.​ (2017) 
    Oncotarget, 8(9) pp. 14719​-14735​.​ DOI: https://doi.org/10.18632/oncotarget.14830 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | Research Paper
    ​ ​106 Three-dimensional agent-based modeling of the human epidermal structure and barrier function with realistic cell morphology​
    Stamatas, G.; Sütterlin, T.; Tsingos, E.; Bensaci, J. & Grabe, N. ​ (2017) 
    Journal of Investigative Dermatology, 137(10) pp. S211​.​ DOI: https://doi.org/10.1016/j.jid.2017.07.416 
    ​Details  DOI 
  • 2017 | Journal Article | Research Paper
    ​ ​Identification of T cell target antigens in glioblastoma stem-like cells using an integrated proteomics-based approach in patient specimens​
    Rapp, C.; Warta, R.; Stamova, S.; Nowrouzi, A.; Geisenberger, C.; Gal, Z. & Roesch, S. et al.​ (2017) 
    Acta Neuropathologica, 134(2) pp. 297​-316​.​ DOI: https://doi.org/10.1007/s00401-017-1702-1 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​In-depth tissue profiling using multiplexed immunohistochemical consecutive staining on single slide​
    Remark, R.; Merghoub, T.; Grabe, N. ; Litjens, G.; Damotte, D.; Wolchok, J. D. & Merad, M. et al.​ (2016) 
    Science Immunology, 1(1) art. aaf6925​.​ DOI: https://doi.org/10.1126/sciimmunol.aaf6925 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Spatial intratumoral heterogeneity of proliferation in immunohistochemical images of solid tumors​
    Valous, N. A.; Lahrmann, B.; Halama, N.; Bergmann, F.; Jäger, D. & Grabe, N. ​ (2016) 
    Medical Physics, 43(6) pp. 2936​-2947​.​ DOI: https://doi.org/10.1118/1.4949003 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Tumoral Immune Cell Exploitation in Colorectal Cancer Metastases Can Be Targeted Effectively by Anti-CCR5 Therapy in Cancer Patients​
    Halama, N.; Zoernig, I.; Berthel, A.; Kahlert, C.; Klupp, F.; Suarez-Carmona, M. & Suetterlin, T. et al.​ (2016) 
    Cancer Cell, 29(4) pp. 587​-601​.​ DOI: https://doi.org/10.1016/j.ccell.2016.03.005 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Combined Treatment of ATRA with Epigenetic Drugs Increases Aggressiveness of Glioma Xenografts​
    Schmoch, T.; Gal, Z.; Mock, A.; Mossemann, J.; Lahrmann, B.; Grabe, N.   & Schmezer, P. et al.​ (2016) 
    Anticancer Research, 36(4) pp. 1489​-1496​.​
    ​Details  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Transcriptomic analysis of aggressive meningiomas identifies PTTG1 and LEPR as prognostic biomarkers independent of WHO grade​
    Schmidt, M.; Mock, A.; Jungk, C.; Sahm, F.; Ull, A. T.; Warta, R. & Lamszus, K. et al.​ (2016) 
    Oncotarget, 7(12) pp. 14551​-14568​.​ DOI: https://doi.org/10.18632/oncotarget.7396 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Low density of FOXP3-positive T cells in normal colonic mucosa is related to the presence of beta2-microglobulin mutations in Lynch syndrome-associated colorectal cancer​
    Echterdiek, F.; Janikovits, J.; Staffa, L.; Müller, M.; Lahrmann, B.; Frühschütz, M. & Hartog, B. et al.​ (2016) 
    OncoImmunology, 5(2) art. e1075692​.​ DOI: https://doi.org/10.1080/2162402X.2015.1075692 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Directed random walks and constraint programming reveal active pathways in hepatocyte growth factor signaling​
    Kittas, A.; Delobelle, A.; Schmitt, S.; Breuhahn, K.; Guziolowski, C. & Grabe, N. ​ (2016) 
    The FEBS Journal, 283(2) pp. 350​-360​.​ DOI: https://doi.org/10.1111/febs.13580 
    ​Details  DOI  PMID  PMC 
  • 2016 | Conference Paper
    ​ ​Abstract A085: Immune evasion and PD-1-positive T cell infiltration in DNA mismatch repair-deficient colorectal cancer​
    Kloor, M.; Janikovits, J.; Krzykalla, J.; Benner, A.; Grabe, N. ; Echterdiek, F. & Mueller, M. et al.​ (2016)
    pp. A085​-A085. ​Second CRI-CIMT-EATI-AACR International Cancer Immunotherapy Conference: Translating Science into Survival​, New York, NY. DOI: https://doi.org/10.1158/2326-6066.IMM2016-A085 
    ​Details  DOI 
  • 2016 | Journal Article | Research Paper
    ​ ​Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images​
    Lotz, J. ; Olesch, J.; Muller, B.; Polzin, T.; Galuschka, P.; Lotz, J. M. & Heldmann, S. et al.​ (2016) 
    IEEE Transactions on Bio-Medical Engineering, 63(9) pp. 1812​-1819​.​ DOI: https://doi.org/10.1109/TBME.2015.2503122 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Reduced Microvascular Density in Omental Biopsies of Children with Chronic Kidney Disease​
    Burkhardt, D.; Bartosova, M.; Schaefer, B.; Grabe, N. ; Lahrmann, B.; Nasser, H. & Freise, C. et al.​ (2016) 
    PLoS One, 11(11) art. e0166050​.​ DOI: https://doi.org/10.1371/journal.pone.0166050 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​Identification of immunotherapeutic targets by genomic profiling of rectal NET metastases​
    Koşaloğlu, Z.; Zörnig, I.; Halama, N.; Kaiser, I.; Buchhalter, I.; Grabe, N.   & Eils, R. et al.​ (2016) 
    OncoImmunology, 5(11) art. e1213931​.​ DOI: https://doi.org/10.1080/2162402X.2016.1213931 
    ​Details  DOI  PMID  PMC 
  • 2016 | Journal Article | Research Paper
    ​ ​LOC283731 promoter hypermethylation prognosticates survival after radiochemotherapy in IDH1 wild-type glioblastoma patients​
    Mock, A.; Geisenberger, C.; Orlik, C.; Warta, R.; Schwager, C.; Jungk, C. & Dutruel, C. et al.​ (2016) 
    International Journal of Cancer, 139(2) pp. 424​-432​.​ DOI: https://doi.org/10.1002/ijc.30069 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Role of NR1I2 (pregnane X receptor) polymorphisms in head and neck squamous cell carcinoma​
    Reuter, T.; Warta, R.; Theile, D.; Meid, A. D.; Rigalli, J. P.; Mogler, C. & Herpel, E. et al.​ (2015) 
    Naunyn-Schmiedeberg's Archives of Pharmacology, 388(11) pp. 1141​-1150​.​ DOI: https://doi.org/10.1007/s00210-015-1150-1 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Loss of SOX2 expression induces cell motility via vimentin up-regulation and is an unfavorable risk factor for survival of head and neck squamous cell carcinoma​
    Bayo, P.; Jou, A.; Stenzinger, A.; Shao, C.; Gross, M.; Jensen, A. & Grabe, N.  et al.​ (2015) 
    Molecular Oncology, 9(8) pp. 1704​-1719​.​ DOI: https://doi.org/10.1016/j.molonc.2015.05.006 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Molecular profiling of long-term survivors identifies a subgroup of glioblastoma characterized by chromosome 19/20 co-gain​
    Geisenberger, C.; Mock, A.; Warta, R.; Rapp, C.; Schwager, C.; Korshunov, A. & Nied, A.-K. et al.​ (2015) 
    Acta Neuropathologica, 130(3) pp. 419​-434​.​ DOI: https://doi.org/10.1007/s00401-015-1427-y 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Characterization of Skin Aging-Associated Secreted Proteins (SAASP) Produced by Dermal Fibroblasts Isolated from Intrinsically Aged Human Skin​
    Waldera Lupa, D. M.; Kalfalah, F.; Safferling, K.; Boukamp, P.; Poschmann, G.; Volpi, E. & Götz-Rösch, C. et al.​ (2015) 
    Journal of Investigative Dermatology, 135(8) pp. 1954​-1968​.​ DOI: https://doi.org/10.1038/jid.2015.120 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​CytoASP: a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks​
    Kittas, A.; Barozet, A.; Sereshti, J.; Grabe, N.   & Tsoka, S.​ (2015) 
    BMC Systems Biology, 9(1) pp. 34​.​ DOI: https://doi.org/10.1186/s12918-015-0179-6 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Phosphorylation of AKT(Ser473) serves as an independent prognostic marker for radiosensitivity in advanced head and neck squamous cell carcinoma​
    Freudlsperger, C.; Horn, D.; Weißfuß, S.; Weichert, W.; Weber, K.-J.; Saure, D. & Sharma, S. et al.​ (2015) 
    International Journal of Cancer, 136(12) pp. 2775​-2785​.​ DOI: https://doi.org/10.1002/ijc.29328 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​High S100A8 and S100A12 protein expression is a favorable prognostic factor for survival of oropharyngeal squamous cell carcinoma​
    Funk, S.; Mark, R.; Bayo, P.; Flechtenmacher, C.; Grabe, N. ; Angel, P. & Plinkert, P. K. et al.​ (2015) 
    International Journal of Cancer, 136(9) pp. 2037​-2046​.​ DOI: https://doi.org/10.1002/ijc.29262 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Regulation and function of Myb-binding protein 1A (MYBBP1A) in cellular senescence and pathogenesis of head and neck cancer​
    George, B.; Horn, D.; Bayo, P.; Zaoui, K.; Flechtenmacher, C.; Grabe, N.   & Plinkert, P. et al.​ (2015) 
    Cancer Letters, 358(2) pp. 191​-199​.​ DOI: https://doi.org/10.1016/j.canlet.2014.12.042 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Prognostic significance of spontaneous antibody responses against tumor-associated antigens in malignant melanoma patients​
    Zörnig, I.; Halama, N.; Lorenzo Bermejo, J.; Ziegelmeier, C.; Dickes, E.; Migdoll, A. & Kaiser, I. et al.​ (2015) 
    International Journal of Cancer, 136(1) pp. 138​-151​.​ DOI: https://doi.org/10.1002/ijc.28980 
    ​Details  DOI  PMID  PMC 
  • 2015 | Journal Article | Research Paper
    ​ ​Mismatch repair-deficient crypt foci in Lynch syndrome--molecular alterations and association with clinical parameters​
    Staffa, L.; Echterdiek, F.; Nelius, N.; Benner, A.; Werft, W.; Lahrmann, B. & Grabe, N.  et al.​ (2015) 
    PLoS One, 10(3) art. e0121980​.​ DOI: https://doi.org/10.1371/journal.pone.0121980 
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | Research Paper
    ​ ​Pathogenic role of the eight probably/possibly carcinogenic HPV types 26, 53, 66, 67, 68, 70, 73 and 82 in cervical cancer​
    Halec, G.; Alemany, L.; Lloveras, B.; Schmitt, M.; Alejo, M.; Bosch, F. X. & Tous, S. et al.​ (2014) 
    The Journal of Pathology, 234(4) pp. 441​-451​.​ DOI: https://doi.org/10.1002/path.4405 
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | Research Paper
    ​ ​Aberrant self-renewal and quiescence contribute to the aggressiveness of glioblastoma​
    Campos, B.; Gal, Z.; Baader, A.; Schneider, T.; Sliwinski, C.; Gassel, K. & Bageritz, J. et al.​ (2014) 
    The Journal of Pathology, 234(1) pp. 23​-33​.​ DOI: https://doi.org/10.1002/path.4366 
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | Research Paper
    ​ ​Antiproliferative efficacies but minor drug transporter inducing effects of paclitaxel, cisplatin, or 5-fluorouracil in a murine xenograft model for head and neck squamous cell carcinoma​
    Theile, D.; Gal, Z.; Warta, R.; Rigalli, J. P.; Lahrmann, B.; Grabe, N.   & Herold-Mende, C. et al.​ (2014) 
    Cancer Biology & Therapy, 15(4) pp. 436​-442​.​ DOI: https://doi.org/10.4161/cbt.27632 
    ​Details  DOI  PMID  PMC 
  • 2014 | Journal Article | Research Paper
    ​ ​Association of drug transporter expression with mortality and progression-free survival in stage IV head and neck squamous cell carcinoma​
    Warta, R.; Theile, D.; Mogler, C.; Herpel, E.; Grabe, N. ; Lahrmann, B. & Plinkert, P. K. et al.​ (2014) 
    PLoS One, 9(9) art. e108908​.​ DOI: https://doi.org/10.1371/journal.pone.0108908 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Wound healing revised: a novel reepithelialization mechanism revealed by in vitro and in silico models​
    Safferling, K.; Sütterlin, T.; Westphal, K.; Ernst, C.; Breuhahn, K.; James, M. & Jäger, D. et al.​ (2013) 
    The Journal of Cell Biology, 203(4) pp. 691​-709​.​ DOI: https://doi.org/10.1083/jcb.201212020 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Identification of oropharyngeal squamous cell carcinomas with active HPV16 involvement by immunohistochemical analysis of the retinoblastoma protein pathway​
    Holzinger, D.; Flechtenmacher, C.; Henfling, N.; Kaden, I.; Grabe, N. ; Lahrmann, B. & Schmitt, M. et al.​ (2013) 
    International Journal of Cancer, 133(6) pp. 1389​-1399​.​ DOI: https://doi.org/10.1002/ijc.28142 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​HPV-related methylation signature predicts survival in oropharyngeal squamous cell carcinomas​
    Kostareli, E.; Holzinger, D.; Bogatyrova, O.; Hielscher, T.; Wichmann, G.; Keck, M. & Lahrmann, B. et al.​ (2013) 
    The Journal of Clinical Investigation, 123(6) pp. 2488​-2501​.​ DOI: https://doi.org/10.1172/JCI67010 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Sequence mutations of the substrate binding pocket of stem cell factor and multidrug resistance protein ABCG2 in renal cell cancer: a possible link to treatment resistance​
    Zoernig, I.; Ziegelmeier, C.; Lahrmann, B.; Grabe, N. ; Jäger, D. & Halama, N.​ (2013) 
    Oncology Reports, 29(5) pp. 1697​-1700​.​ DOI: https://doi.org/10.3892/or.2013.2324 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Hepatic metastases of colorectal cancer are rather homogeneous but differ from primary lesions in terms of immune cell infiltration​
    Halama, N.; Spille, A.; Lerchl, T.; Brand, K.; Herpel, E.; Welte, S. & Keim, S. et al.​ (2013) 
    OncoImmunology, 2(4) art. e24116​.​ DOI: https://doi.org/10.4161/onci.24116 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Multistage histopathological image segmentation of Iba1-stained murine microglias in a focal ischemia model: methodological workflow and expert validation​
    Valous, N. A.; Lahrmann, B.; Zhou, W.; Veltkamp, R. & Grabe, N. ​ (2013) 
    Journal of Neuroscience Methods, 213(2) pp. 250​-262​.​ DOI: https://doi.org/10.1016/j.jneumeth.2012.12.017 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Submaxillary gland androgen-regulated protein 3A expression is an unfavorable risk factor for the survival of oropharyngeal squamous cell carcinoma patients after surgery​
    Koffler, J.; Holzinger, D.; Sanhueza, G. A.; Flechtenmacher, C.; Zaoui, K.; Lahrmann, B. & Grabe, N.  et al.​ (2013) 
    European Archives of Oto-Rhino-Laryngology and Head & Neck, 270(4) pp. 1493​-1500​.​ DOI: https://doi.org/10.1007/s00405-012-2201-6 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Bridging the scales: semantic integration of quantitative SBML in graphical multi-cellular models and simulations with EPISIM and COPASI​
    Sütterlin, T.; Kolb, C.; Dickhaus, H.; Jäger, D. & Grabe, N. ​ (2013) 
    Bioinformatics, 29(2) pp. 223​-229​.​ DOI: https://doi.org/10.1093/bioinformatics/bts659 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Postischemic brain infiltration of leukocyte subpopulations differs among murine permanent and transient focal cerebral ischemia models​
    Zhou, W.; Liesz, A.; Bauer, H.; Sommer, C.; Lahrmann, B.; Valous, N. & Grabe, N.  et al.​ (2013) 
    Brain Pathology, 23(1) pp. 34​-44​.​ DOI: https://doi.org/10.1111/j.1750-3639.2012.00614.x 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Semantic focusing allows fully automated single-layer slide scanning of cervical cytology slides​
    Lahrmann, B.; Valous, N. A.; Eisenmann, U.; Wentzensen, N. & Grabe, N. ​ (2013) 
    PLoS One, 8(4) art. e61441​.​ DOI: https://doi.org/10.1371/journal.pone.0061441 
    ​Details  DOI  PMID  PMC 
  • 2013 | Journal Article | Research Paper
    ​ ​Stathmin regulates keratinocyte proliferation and migration during cutaneous regeneration​
    Schmitt, S.; Safferling, K.; Westphal, K.; Hrabowski, M.; Müller, U.; Angel, P. & Wiechert, L. et al.​ (2013) 
    PLoS One, 8(9) art. e75075​.​ DOI: https://doi.org/10.1371/journal.pone.0075075 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | Research Paper
    ​ ​Expression analysis of aldehyde dehydrogenase 1A1 (ALDH1A1) in colon and rectal cancer in association with prognosis and response to chemotherapy​
    Kahlert, C.; Gaitzsch, E.; Steinert, G.; Mogler, C.; Herpel, E.; Hoffmeister, M. & Jansen, L. et al.​ (2012) 
    Annals of Surgical Oncology, 19(13) pp. 4193​-4201​.​ DOI: https://doi.org/10.1245/s10434-012-2518-9 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | Research Paper
    ​ ​In silico accelerated identification of structurally conserved CD8+ and CD4+ T-cell epitopes in high-risk HPV types​
    Gupta, S. K.; Srivastava, M.; Akhoon, B. A.; Gupta, S. K. & Grabe, N. ​ (2012) 
    Infection Genetics and Evolution, 12(7) pp. 1513​-1518​.​ DOI: https://doi.org/10.1016/j.meegid.2012.02.022 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | Research Paper
    ​ ​Automatic generation of causal networks linking growth factor stimuli to functional cell state changes​
    Guziolowski, C.; Kittas, A.; Dittmann, F. & Grabe, N. ​ (2012) 
    The FEBS Journal, 279(18) pp. 3462​-3474​.​ DOI: https://doi.org/10.1111/j.1742-4658.2012.08616.x 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | Research Paper
    ​ ​Sequential metastases of colorectal cancer: Immunophenotypes and spatial distributions of infiltrating immune cells in relation to time and treatments​
    Keim, S.; Zoernig, I.; Spille, A.; Lahrmann, B.; Brand, K.; Herpel, E. & Grabe, N.  et al.​ (2012) 
    OncoImmunology, 1(5) pp. 593​-599​.​ DOI: https://doi.org/10.4161/onci.20179 
    ​Details  DOI  PMID  PMC 
  • 2012 | Journal Article | Research Paper
    ​ ​The local immunological microenvironment in colorectal cancer as a prognostic factor for treatment decisions in the clinic: The way ahead​
    Halama, N.; Zoernig, I.; Grabe, N.   & Jaeger, D.​ (2012) 
    OncoImmunology, 1(1) pp. 62​-66​.​ DOI: https://doi.org/10.4161/onci.1.1.18460 
    ​Details  DOI  PMID  PMC 
  • 2012 | Conference Paper
    ​ ​Abstract 396: Sequential metastases of colorectal cancer: Treatment, immunophenotypes and spatial distributions of infiltrating immune cells​
    Halama, N.; Keim, S.; Zoernig, I.; Schirmacher, P.; Grabe, N.   & Jaeger, D.​ (2012)
    ​Proceedings pp. 396​-396. ​AACR 103rd Annual Meeting 2012​, Chicago, IL. DOI: https://doi.org/10.1158/1538-7445.AM2012-396 
    ​Details  DOI 
  • 2012 | Conference Paper
    ​ ​Abstract 4923: Understanding cancer invasion by the systems biological analysis of collective cell migration in 3D tissue models​
    Grabe, N. ; Safferling, K.; Westphal, K.; Guziolowski, C.; Kittas, A.; Ernst, C. & Halama, N. et al.​ (2012)
    pp. 4923​-4923. ​AACR 103rd Annual Meeting​, Chicago, IL. DOI: https://doi.org/10.1158/1538-7445.AM2012-4923 
    ​Details  DOI 
  • 2011 | Journal Article | Research Paper
    ​ ​Localization and density of immune cells in the invasive margin of human colorectal cancer liver metastases are prognostic for response to chemotherapy​
    Halama, N.; Michel, S.; Kloor, M.; Zoernig, I.; Benner, A.; Spille, A. & Pommerencke, T. et al.​ (2011) 
    Cancer Research, 71(17) pp. 5670​-5677​.​ DOI: https://doi.org/10.1158/0008-5472.CAN-11-0268 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | Research Paper
    ​ ​Aberrant expression of retinoic acid signaling molecules influences patient survival in astrocytic gliomas​
    Campos, B.; Centner, F.-S.; Bermejo, J. L.; Ali, R.; Dorsch, K.; Wan, F. & Felsberg, J. et al.​ (2011) 
    The American Journal of Pathology, 178(5) pp. 1953​-1964​.​ DOI: https://doi.org/10.1016/j.ajpath.2011.01.051 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | Research Paper
    ​ ​Association of stem cell-related markers and survival in astrocytic gliomas​
    Wan, F.; Herold-Mende, C.; Campos, B.; Centner, F.-S.; Dictus, C.; Becker, N. & Devens, F. et al.​ (2011) 
    Biomarkers, 16(2) pp. 136​-143​.​ DOI: https://doi.org/10.3109/1354750X.2010.536256 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | Research Paper
    ​ ​Natural killer cells are scarce in colorectal carcinoma tissue despite high levels of chemokines and cytokines​
    Halama, N.; Braun, M.; Kahlert, C.; Spille, A.; Quack, C.; Rahbari, N. & Koch, M. et al.​ (2011) 
    Clinical Cancer Research, 17(4) pp. 678​-689​.​ DOI: https://doi.org/10.1158/1078-0432.CCR-10-2173 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | Research Paper
    ​ ​Expression of nuclear receptor corepressors and class I histone deacetylases in astrocytic gliomas​
    Campos, B.; Bermejo, J. L.; Han, L.; Felsberg, J.; Ahmadi, R.; Grabe, N.   & Reifenberger, G. et al.​ (2011) 
    Cancer Science, 102(2) pp. 387​-392​.​ DOI: https://doi.org/10.1111/j.1349-7006.2010.01792.x 
    ​Details  DOI  PMID  PMC 
  • 2011 | Conference Paper
    ​ ​Abstract 795: Patterns of T-cell distribution at the invasive margin of colorectal cancer liver metastases: Downstream recruitment of T cells and spatial heterogeneity​
    Halama, N.; Zoernig, I.; Spille, A.; Schirmacher, P.; Brand, K.; Falk, C. & Grabe, N.  et al.​ (2011)
    ​Proceedings pp. 795​-795. ​AACR 102nd Annual Meeting 2011​, Orlando, FL. DOI: https://doi.org/10.1158/1538-7445.AM2011-795 
    ​Details  DOI 
  • 2011 | Journal Article | Research Paper
    ​ ​A comparison of dacron versus Flocked nylon swabs for anal cytology specimen collection​
    Gage, J. C; Ghosh, A.; Borgonovo, S.; Follansbee, S.; Wentzensen, N.; Gravitt, P. E. & Grabe, N.  et al.​ (2011) 
    Acta Cytologica, 55(4) pp. 364​-367​.​ DOI: https://doi.org/10.1159/000329488 
    ​Details  DOI  PMID  PMC 
  • 2011 | Journal Article | Research Paper
    ​ ​Automatic tumor-stroma separation in fluorescence TMAs enables the quantitative high-throughput analysis of multiple cancer biomarkers​
    Lahrmann, B.; Halama, N.; Sinn, H.-P.; Schirmacher, P.; Jaeger, D. & Grabe, N. ​ (2011) 
    PLoS One, 6(12) art. e28048​.​ DOI: https://doi.org/10.1371/journal.pone.0028048 
    ​Details  DOI  PMID  PMC 
  • 2010 | Journal Article | Research Paper
    ​ ​Quantification of prognostic immune cell markers in colorectal cancer using whole slide imaging tumor maps​
    Halama, N.; Zoernig, I.; Spille, A.; Michel, S.; Kloor, M.; Grauling-Halama, S. & Westphal, K. et al.​ (2010) 
    Analytical and Quantitative Cytology and Histology, 32(6) pp. 333​-340​.​
    ​Details  PMID  PMC 
  • 2010 | Journal Article | Research Paper
    ​ ​Robust gridding of TMAs after whole-slide imaging using template matching​
    Lahrmann, B.; Halama, N.; Westphal, K.; Ernst, C.; Elsawaf, Z.; Sinn, P. & Bosch, F. X. et al.​ (2010) 
    Cytometry. Part A, 77(12) pp. 1169​-1176​.​ DOI: https://doi.org/10.1002/cyto.a.20949 
    ​Details  DOI  PMID  PMC 
  • 2010 | Journal Article | Research Paper
    ​ ​Spatial quantification and classification of skin response following perturbation using organotypic skin cultures​
    Pommerencke, T.; Westphal, K.; Ernst, C.; Safferling, K.; Dickhaus, H.; Steinberg, T. & Tomakidi, P. et al.​ (2010) 
    Bioinformatics, 26(21) pp. 2760​-2766​.​ DOI: https://doi.org/10.1093/bioinformatics/btq525 
    ​Details  DOI  PMID  PMC 
  • 2010 | Journal Article | Research Paper
    ​ ​Impaired skin regeneration and remodeling after cutaneous injury and chemically induced hyperplasia in taps-transgenic mice​
    Hildenbrand, M.; Rhiemeier, V.; Hartenstein, B.; Lahrmann, B.; Grabe, N. ; Angel, P. & Hess, J.​ (2010) 
    Journal of Investigative Dermatology, 130(7) pp. 1922​-1930​.​ DOI: https://doi.org/10.1038/jid.2010.54 
    ​Details  DOI  PMID  PMC 
  • 2010 | Conference Paper
    ​ ​Abstract 1917: Immunological Tumor Maps: a Landscape of Infiltrating Immune Cells in Colorectal Cancer Based on Complete Tissue Section Analyses​
    Halama, N.; Zoernig, I.; Foged, N. T.; Schirmacher, P.; Jaeger, D. & Grabe, N. ​ (2010)
    ​Proceedings pp. 1917​-1917. ​AACR 101st Annual Meeting 2010​, Washington, DC. DOI: https://doi.org/10.1158/1538-7445.AM10-1917 
    ​Details  DOI 
  • 2010 | Journal Article | Research Paper
    ​ ​A virtual microscopy system to scan, evaluate and archive biomarker enhanced cervical cytology slides​
    Grabe, N. ; Lahrmann, B.; Pommerencke, T.; von Knebel Doeberitz, M.; Reuschenbach, M. & Wentzensen, N.​ (2010) 
    Cellular Oncology, 32(1-2) pp. 109​-119​.​ DOI: https://doi.org/10.3233/CLO-2009-0508 
    ​Details  DOI  PMID  PMC 
  • 2009 | Journal Article | Research Paper
    ​ ​Estimation of immune cell densities in immune cell conglomerates: an approach for high-throughput quantification​
    Halama, N.; Zoernig, I.; Spille, A.; Westphal, K.; Schirmacher, P.; Jaeger, D. & Grabe, N. ​ (2009) 
    PLoS One, 4(11) art. e7847​.​ DOI: https://doi.org/10.1371/journal.pone.0007847 
    ​Details  DOI  PMID  PMC 
  • 2009 | Journal Article | Research Paper
    ​ ​Modeling multi-cellular behavior in epidermal tissue homeostasis via finite state machines in multi-agent systems​
    Sütterlin, T.; Huber, S.; Dickhaus, H. & Grabe, N. ​ (2009) 
    Bioinformatics, 25(16) pp. 2057​-2063​.​ DOI: https://doi.org/10.1093/bioinformatics/btp361 
    ​Details  DOI  PMID  PMC 
  • 2009 | Journal Article | Research Paper
    ​ ​From virtual microscopy to systems pathology: a meeting report of the 1st European workshop on tissue imaging and analysis, Heidelberg, Germany, 13-14 February 2009​
    Grabe, N.   & Schirmacher, P.​ (2009) 
    Virchows Archiv, 455(2) pp. 193​-196​.​ DOI: https://doi.org/10.1007/s00428-009-0810-2 
    ​Details  DOI  PMID  PMC 
  • 2008 | Journal Article | Research Paper
    ​ ​Connective-Tissue Fibroblasts Established on Micropillar Interfaces are Pivotal for Epithelial-Tissue Morphogenesis​
    Mussig, E.; Steinberg, T.; Schulz, S.; Spatz, J. P.; Ulmer, J.; Grabe, N.   & Kohl, A. et al.​ (2008) 
    Advanced Functional Materials, 18(19) pp. 2919​-2929​.​ DOI: https://doi.org/10.1002/adfm.200800381 
    ​Details  DOI 
  • 2007 | Journal Article | Research Paper
    ​ ​Reconstructing protein networks of epithelial differentiation from histological sections​
    Grabe, N. ; Pommerencke, T.; Steinberg, T.; Dickhaus, H. & Tomakidi, P.​ (2007) 
    Bioinformatics, 23(23) pp. 3200​-3208​.​ DOI: https://doi.org/10.1093/bioinformatics/btm504 
    ​Details  DOI  PMID  PMC 
  • 2007 | Journal Article | Research Paper
    ​ ​Simulating psoriasis by altering transit amplifying cells​
    Grabe, N.   & Neuber, K.​ (2007) 
    Bioinformatics, 23(11) pp. 1309​-1312​.​ DOI: https://doi.org/10.1093/bioinformatics/btm042 
    ​Details  DOI  PMID  PMC 
  • 2007 | Journal Article | Research Paper
    ​ ​Early keratinocyte differentiation on micropillar interfaces​
    Steinberg, T.; Schulz, S.; Spatz, J. P.; Grabe, N. ; Mussig, E.; Kohl, A. & Komposch, G. et al.​ (2007) 
    Nano Letters, 7(2) pp. 287​-294​.​ DOI: https://doi.org/10.1021/nl062271z 
    ​Details  DOI  PMID  PMC 
  • 2005 | Journal Article | Research Paper
    ​ ​A multicellular systems biology model predicts epidermal morphology, kinetics and Ca2+ flow​
    Grabe, N.   & Neuber, K.​ (2005) 
    Bioinformatics, 21(17) pp. 3541​-3547​.​ DOI: https://doi.org/10.1093/bioinformatics/bti585 
    ​Details  DOI  PMID  PMC 
  • 2004 | Journal Article | Research Paper
    ​ ​Highly specific prediction of phosphorylation sites in proteins​
    Koenig, M. & Grabe, N. ​ (2004) 
    Bioinformatics, 20(18) pp. 3620​-3627​.​ DOI: https://doi.org/10.1093/bioinformatics/bth455 
    ​Details  DOI  PMID  PMC 

Publication List

All Articles (Book & Journal) Conference objects Books & Book chapters Book chapters & Review Articles & Preprints Papers (Journal & Conference)

Filter

Active filter:
Fulltext:  No Fulltext

Type

Subtype

Date issued

Author

Language

Options

Citation Style

GRO View APA Chicago MLA Vancouver
https://publications.goettingen-research-online.de URI: /cris/rp/rp114981
ID: 0000000
PREF: default TOKEN:

0

Sort

Issue Date
ASC DESC
Title
ASC DESC

Embed

JavaScript
Link

Export

Activate Export Mode
Deactivate Export Mode

Select some or all items (max. 800 for CSV/Excel) from the publications list, then choose an export format below.