EXC 2067: Multiscale Bioimaging RSS Feed


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  • 2024 | Preprint
    ​ ​Near-optimal information relay by the neuronal population of layer 4 barrel cortex​
    Revah, O.; Wolf, F.; Gutnick, M. J.& Neef, A.​ (2024). DOI: https://doi.org/10.1101/2024.02.15.580451 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Rational Approximation of Golden Angles for Simple and Reproducible Radial Sampling​
    Scholand, N.; Graf, C.; Mackner, D.; Holme, H. C. M.& Uecker, M.​ (2024). DOI: https://doi.org/10.48550/ARXIV.2401.02892 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Thermogenetics for cardiac pacing​
    Balatskiy, A. V.; Nesterenko, A. M.; Lanin, A. A.; Ovechkina, V. S.; Sabinin, S. S.; Fetisova, E. S.& Moshchenko, A. A. et al.​ (2024). DOI: https://doi.org/10.1101/2024.01.02.573885 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Cytoarchitecture of SARS-CoV-2 infected hamster lungs by X-ray phase contrast tomography: imaging workflow and classification for drug testing​
    Reichmann, J. ; Sarrazin, C.; Schmale, S.; Blaurock, C.; Balkema-Buschmann, A.; Schmitzer, B.  & Salditt, T.​ (2024). DOI: https://doi.org/10.1101/2024.01.21.576083 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​CryoRhodopsins: a comprehensive characterization of a new clade of microbial rhodopsins from cold environments​
    Lamm, G.; Marin, E.; Schellbach, A.; Stetsenko, A.; Alekseev, A.; Bourenkov, G.& Borshchevskiy, V. et al.​ (2024). DOI: https://doi.org/10.1101/2024.01.15.575777 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Model-Based Reconstruction for Joint Estimation of $T_{1}$, $R_{2}^{*}$ and $B_{0}$ Field Maps Using Single-Shot Inversion-Recovery Multi-Echo Radial FLASH​
    Wang, X.; Scholand, N.; Tan, Z.; Mackner, D.; Telezki, V.; Blumenthal, M.& Schaten, P. et al.​ (2024). DOI: https://doi.org/10.48550/ARXIV.2402.05366 
    ​Details  DOI  arXiv 
  • 2024 | Preprint
    ​ ​Modeling spatial contrast sensitivity in responses of primate retinal ganglion cells to natural movies​
    Sridhar, S.; Vystrčilová, M.; Khani, M. H.; Karamanlis, D.; Schreyer, H. M.; Ramakrishna, V.& Krüppel, S. et al.​ (2024). DOI: https://doi.org/10.1101/2024.03.05.583449 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Cytoarchitecture of SARS-CoV-2 infected hamster lungs by X-ray phase contrast tomography: imaging workflow and classification for drug testing​
    Salditt, T.; Reichmann, J.; Sarrazin, C.; Schmale, S.; Blaurock, C.; Schmitzer, B.& Balkema-Buschmann, A.​ (2024). DOI: https://doi.org/10.21203/rs.3.rs-3958072/v1 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Convolutional neural network models of the primate retina reveal adaptation to natural stimulus statistics​
    Vystrčilová, M.; Sridhar, S.; Burg, M. F.; Gollisch, T.& Ecker, A. S.​ (2024). DOI: https://doi.org/10.1101/2024.03.06.583740 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Mechanism of human PINK1 activation at the TOM complex in a reconstituted system​
    Raimi, O. G.; Ojha, H.; Ehses, K.; Dederer, V.; Lange, S. M.; Rivera, C. P.& Deegan, T. D. et al.​ (2024). DOI: https://doi.org/10.1101/2023.12.23.573181 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Most discriminative stimuli for functional cell type clustering​
    Burg, M. F.; Zenkel, T.; Vystrčilová, M.; Oesterle, J.; Höfling, L.; Willeke, K. F.& Lause, J. et al.​ (2024). DOI: https://doi.org/10.48550/ARXIV.2401.05342 
    ​Details  DOI  arXiv 
  • 2024 | Preprint
    ​ ​Nanoscale architecture and dynamics of CaV1.3 channel clusters in cardiac myocytes revealed by single channel nanoscopy​
    Schwenzer, N.; Tsukanov, R.; Kohl, T.; Basak, S.; Seibertz, F.; Voigt, N.& Enderlein, J. et al.​ (2024). DOI: https://doi.org/10.1101/2024.02.26.582084 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​NanoPlex: a universal strategy for fluorescence microscopy multiplexing using nanobodies with erasable signals​
    Mougios, N.; Cotroneo, E. R.; Imse, N.; Setzke, J.; Rizzoli, S.; Simeth, N. A.& Tsukanov, R. et al.​ (2024). DOI: https://doi.org/10.1101/2024.03.18.585511 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Synphilin-1 as a modulator of aSyn assembly​
    Lázaro, D. F.; Amen, T.; Gerhardt, E.; Santos, P. I.; Milovanovic, D.; Höglinger, G.& Outeiro, T. F.​ (2024). DOI: https://doi.org/10.1101/2024.03.05.583522 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​In-situ architecture of the human prohibitin complex​
    Lange, F.; Ratz, M.; Dohrke, J.-N.; Wenzel, D.; Ilgen, P.; Riedel, D.& Jakobs, S.​ (2024). DOI: https://doi.org/10.1101/2024.02.14.579514 
    ​Details  DOI 
  • 2024 | Preprint
    ​ ​Multiscale Quantile Regression with Local Error Control​
    Liu, Z.& Li, H. ​ (2024). DOI: https://doi.org/10.48550/ARXIV.2403.11356 
    ​Details  DOI  arXiv 
  • 2024 | Preprint
    ​ ​MultiMatch: Geometry-Informed Colocalization in Multi-Color Super-Resolution Microscopy​
    Naas, J.; Nies, G.; Li, H. ; Stoldt, S. ; Schmitzer, B. ; Jakobs, S.  & Munk, A. ​ (2024). DOI: https://doi.org/10.1101/2024.02.28.581557 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Prediction mismatch responses arise as corrections of a predictive spiking code​
    van Driel, K.; Rudelt, L.; Priesemann, V.& Mikulasch, F. A.​ (2023). DOI: https://doi.org/10.1101/2023.11.16.567335 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Quick Adaptive Ternary Segmentation: An Efficient Decoding Procedure For Hidden Markov Models​
    Mösching, A.; Li, H.  & Munk, A. ​ (2023). DOI: https://doi.org/10.48550/arxiv.2305.18578 
    ​Details  DOI  arXiv 
  • 2023 | Preprint
    ​ ​Vimentin intermediate filaments structure and mechanically support microtubules in cells​
    Blob, A.; Ventzke, D.; Nies, G.; Dühmert, J. N.; Schmitzer, B. ; Munk, A.  & Schaedel, L. et al.​ (2023). DOI: https://doi.org/10.1101/2023.04.19.537509 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Adaptive minimax optimality in statistical inverse problems via SOLIT - Sharp Optimal Lepskii-Inspired Tuning​
    Li, H.  & Werner, F. ​ (2023). DOI: https://doi.org/10.48550/arxiv.2304.10356 
    ​Details  DOI  arXiv 
  • 2023 | Preprint
    ​ ​Signatures of heterogeneity in the statistical structure of target state aligned ensembles​
    Lenner, N.; Häring, M.; Eule, S.; Großhans, J.& Wolf, F.​ (2023). DOI: https://doi.org/10.48550/arxiv.2304.09719 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Reverse-time analysis uncovers universality classes in directional biological dynamics​
    Lenner, N.; Eule, S.; Großhans, J.& Wolf, F. ​ (2023). DOI: https://doi.org/10.48550/ARXIV.2304.03226 
    ​Details  DOI  arXiv 
  • 2023 | Preprint
    ​ ​A novel miR-99b-5p-Zbp1 pathway in microglia contributes to the pathogenesis of schizophrenia​
    Kaurani, L.; Islam, M. R.; Heilbronner, U.; Krüger, D. M.; Zhou, J.; Methi, A.& Strauss, J. et al.​ (2023). DOI: https://doi.org/10.1101/2023.03.21.533602 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Towards a Biological Definition of Parkinson’s Disease​
    Höglinger, G. U.; Adler, C. H.; Berg, D.; Klein, C.; Outeiro, T. F. ; Poewe, W.& Postuma, R. et al.​ (2023). DOI: https://doi.org/10.20944/preprints202304.0108.v1 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Alpha-synuclein oligomers activate NFAT proteins modulating synaptic homeostasis and apoptosis​
    Sant’Anna, R.; Robbs, B. K; de Freitas, J. A.; dos Santos, P. P.; König, A.; Outeiro, T. F.  & Foguel, D.​ (2023). DOI: https://doi.org/10.1101/2023.02.21.529374 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Impact of Phosphorylation on alpha-Synuclein Structural Determinants​
    Dorn, A. E.; de Bruyn, E.; Rossetti, G.; Fernandez, C.; Outeiro, T. F. ; Schulz, J. B.& Carloni, P.​ (2023). DOI: https://doi.org/10.1101/2023.03.10.531864 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Fully-primed slowly-recovering vesicles mediate presynaptic LTP at neocortical neurons​
    Weichard, I.; Taschenberger, H.; Gsell, F.; Bornschein, G.; Ritzau-Jost, A.; Schmidt, H.& Kittel, R. J. et al.​ (2023). DOI: https://doi.org/10.1101/2023.04.11.535831 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​In vitro reconstitution of chromatin domains​
    Quililan, K.; Oberbeckmann, E.; Cramer, P.& Oudelaar, A. M.​ (2023). DOI: https://doi.org/10.1101/2023.02.27.530214 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Flotillin-Associated rhodopsin (FArhodopsin), a widespread paralog of proteorhodopsin in aquatic bacteria with streamlined genomes​
    Haro-Moreno, J. M.; López-Pérez, M.; Alekseev, A.; Podoliak, E.; Kovalev, K.; Gordeliy, V.& Stepanauskas, R. et al.​ (2023). DOI: https://doi.org/10.1101/2023.01.04.522823 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​LZTR1 polymerization provokes cardiac pathology in recessive Noonan syndrome​
    Busley, A. V.; Gutiérrez-Gutiérrez, Ó.; Hammer, E.; Steinegger, M.; Böhmer, L.; Schroeder, H.& Kleinsorge, M. et al.​ (2023). DOI: https://doi.org/10.1101/2023.01.10.523203 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Age-dependent structural reorganization of utricular ribbon synapses​
    Michanski, S.; Henneck, T.; Mukhopadhyay, M.; Steyer, A. M.; Gonzalez, P. A.; Grewe, K.& Ilgen, P. et al.​ (2023). DOI: https://doi.org/10.1101/2022.12.19.521049 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Optical measurement of glutamate release robustly reports short-term plasticity at a fast central synapse​
    Hain, P. J. H.& Moser, T. ​ (2023). DOI: https://doi.org/10.1101/2022.11.27.518035 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Empirical Optimal Transport under Estimated Costs: Distributional Limits and Statistical Applications​
    Hundrieser, S.; Mordant, G.; Weitkamp, C. A.& Munk, A. ​ (2023). DOI: https://doi.org/10.48550/ARXIV.2301.01287 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Reverse-time analysis and boundary classification of directional biological dynamics with multiplicative noise​
    Lenner, N.; Häring, M.; Eule, S.; Großhans, J.& Wolf, F. ​ (2023). DOI: https://doi.org/10.48550/ARXIV.2304.04279 
    ​Details  DOI  arXiv 
  • 2023 | Preprint
    ​ ​Convergence of Empirical Optimal Transport in Unbounded Settings​
    Staudt, T.& Hundrieser, S.​ (2023). DOI: https://doi.org/10.48550/ARXIV.2306.11499 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Doubling the resolution of single-molecule localization microscopy with image scanning microscopy​
    Radmacher, N.; Nevskyi, O.; Gallea, J. I.; Thiele, J. C.; Gregor, I.; Rizzoli, S. O.& Enderlein, J.​ (2023). DOI: https://doi.org/10.1101/2023.08.23.554438 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Cryo-EM structures of lipidic fibrils of amyloid-β (1-40)​
    Frieg, B.; Han, M.; Giller, K.; Dienemann, C.; Riedel, D.; Becker, S.& Andreas, L. B. et al.​ (2023). DOI: https://doi.org/10.1101/2023.06.28.546947 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Multiscale scanning with nuisance parameters​
    König, C.; Munk, A.& Werner, F.​ (2023). DOI: https://doi.org/10.48550/ARXIV.2307.13301 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Infomorphic networks: Locally learning neural networks derived from partial information decomposition​
    Graetz, M.; Makkeh, A.; Schneider, A. C.; Ehrlich, D. A.; Priesemann, V.& Wibral, M.​ (2023). DOI: https://doi.org/10.48550/ARXIV.2306.02149 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Hijacking of internal calcium dynamics by intracellularly residing rhodopsins​
    Eria-Oliveira, A.-S.; Folacci, M.; Chassot, A. A.; Fedou, S.; Thézé, N.; Zabelskii, D.& Alekseev, A. et al.​ (2023). DOI: https://doi.org/10.1101/2023.05.25.542240 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Unravelling ATP processing by the AAA+ protein p97 at the atomic level​
    Shein, M.; Hitzenberger, M.; Cheng, T. C.; Rout, S. R.; Leitl, K. D.; Sato, Y.& Zacharias, M. et al.​ (2023). DOI: https://doi.org/10.1101/2023.08.26.554927 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Metal-induced energy transfer (MIET) imaging of cell surface engineering with multivalent DNA nanobrushes​
    Wang, D.-X.; Liu, B.; Han, G.-M.; Li, Q.-N.; Kong, D.-M.; Enderlein, J.& Chen, T.​ (2023). DOI: https://doi.org/10.1101/2023.07.05.547790 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Measuring sub-nanometer fluctuations at microsecond temporal resolution with metal-and graphene-induced energy transfer spectroscopy​
    Chen, T.; Karedla, N.& Enderlein, J.​ (2023). DOI: https://doi.org/10.1101/2023.05.16.540910 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Segment Anything for Microscopy​
    Archit, A.; Nair, S.; Khalid, N.; Hilt, P.; Rajashekar, V.; Freitag, M.& Gupta, S. et al.​ (2023). DOI: https://doi.org/10.1101/2023.08.21.554208 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Helical superstructures between amyloid and collagen VI in heart-derived fibrils from a patient with Light Chain Amyloidosis​
    Ricagno, S.; Schulte, T.; Chaves-Sanjuan, A.; Speranzini, V.; Sicking, K.; Mazzini, G.& Rognoni, P. et al.​ (2023). DOI: https://doi.org/10.21203/rs.3.rs-3625869/v1 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Efficient and sustained optogenetic control of nervous and cardiac systems​
    Zerche, M.; Hunniford, V.; Alekseev, A.; May, F. E.; Vavakou, A.; Siegenthaler, D.& Hüser, M. A. et al.​ (2023). DOI: https://doi.org/10.1101/2023.11.17.567544 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Structure and dynamics of human cardiac fibroblast nanotubes​
    Schmid-Herbstritt, S. C.; Stief, G.; Greiner, J.; Felekary, A.; Madl, J.; Zeidler, V.& Heer, J. et al.​ (2023). DOI: https://doi.org/10.1101/2023.11.28.568871 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Bioengineering of a human innervated cardiac muscle model​
    Schneider, L. V.; Guobin, B.; Methi, A.; Jensen, O.; Schmoll, K. A.; Setya, M. G.& Sakib, S. et al.​ (2023). DOI: https://doi.org/10.1101/2023.08.18.552653 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​A metabolically controlled contact site between lipid droplets and vacuoles​
    Diep, D. T. V.; Collado, J. F.; Hugenroth, M.; Wälte, M.; Schmidt, O.; Fernández-Busnadiego, R.& Bohnert, M.​ (2023). DOI: https://doi.org/10.1101/2023.04.21.537652 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Boosting of neural circuit chaos at the onset of collective oscillations​
    Palmigiano, A.; Engelken, R.& Wolf, F.​ (2023). DOI: https://doi.org/10.1101/2022.08.28.505598 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​The Drosophila MIC10 orthologue has a propensity to polymerize into cristae-shaping filaments​
    Stephan, T.; Stoldt, S.; Barbot, M.; Carney, T. D.; Lange, F.; Bates, M.& Dib, P. B. et al.​ (2023). DOI: https://doi.org/10.1101/2023.04.17.537183 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​The COMBO window: A chronic cranial implant for multiscale circuit interrogation in mice​
    Edelman, B. J.; Siegenthaler, D.; Wanken, P.; Jenkins, B.; Schmid, B.; Ressle, A.& Gogolla, N. et al.​ (2023). DOI: https://doi.org/10.1101/2023.10.02.560470 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Natural stimuli drive concerted nonlinear responses in populations of retinal ganglion cells​
    Karamanlis, D.; Khani, M. H.; Schreyer, H. M.; Zapp, S. J.; Mietsch, M.& Gollisch, T. ​ (2023). DOI: https://doi.org/10.1101/2023.01.10.523412 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Bridging the gap between presynaptic hair cell function and neural sound encoding​
    Jaime Tobón, L. M.& Moser, T.​ (2023). DOI: https://doi.org/10.1101/2022.10.19.512823 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​A novel subgroup of light-driven sodium pumps with an additional Schiff base counterion​
    Podoliak, E.; Lamm, G. H. U.; Alekseev, A.; Marin, E.; Schellbach, A. V.; Fedotov, D. A.& Stetsenko, A. et al.​ (2023). DOI: https://doi.org/10.1101/2023.10.11.561842 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Applying Super-Resolution and Tomography Concepts to Identify Receptive Field Subunits in the Retina​
    Krüppel, S.; Khani, M. H.; Schreyer, H. M.; Sridhar, S.; Ramakrishna, V.; Zapp, S. J.& Mietsch, M. et al.​ (2023). DOI: https://doi.org/10.1101/2023.11.27.568854 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​CaBP1 and 2 enable sustained CaV1.3 calcium currents and synaptic transmission in inner hair cells​
    Oestreicher, D.; Chepurwar, S.; Kusch, K.; Rankovic, V.; Jung, S.; Strenzke, N.& Pangrsic, T.​ (2023). DOI: https://doi.org/10.1101/2023.10.16.562475 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Secreted-Frizzled-Related Protein 5 Modulates Calcium Handling in Human Ipsc-Cardiomyocytes​
    Weber, F.; Klas, S.; Hindmarsh, V.; Salinas, G.; Toischer, K.; Hasenfuss, G.& Cyganek, L.​ (2023). DOI: https://doi.org/10.2139/ssrn.4544232 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​Observation of E-cadherin Adherens Junction Dynamics with Metal-Induced Energy Transfer Imaging and Spectroscopy​
    Chen, T.; Karedla, N.& Enderlein, J.​ (2023). DOI: https://doi.org/10.1101/2023.12.16.571977 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​The role of structural vs cellular remodeling in arrhythmogenesis: personalized computer models of atrial fibrillation​
    Pikunov, A. V.; Syunyaev, R. A.; Ali, R.; Prakosa, A.; Boyle, P. M.; Steckmeister, V.& Kutschka, I. et al.​ (2023). DOI: https://doi.org/10.1101/2023.05.13.540632 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​SparseProp: Efficient Event-Based Simulation and Training of Sparse Recurrent Spiking Neural Networks​
    Engelken, R.​ (2023). DOI: https://doi.org/10.48550/ARXIV.2312.17216 
    ​Details  DOI  arXiv 
  • 2023 | Preprint
    ​ ​The previously uncharacterized RnpM (YlxR) protein modulates the activity of ribonuclease P in Bacillus subtilis​
    Wicke, D.; Neumann, P.; Gößringer, M.; Chernev, A.; Poehlein, A.; Daniel, R.& Urlaub, H. et al.​ (2023). DOI: https://doi.org/10.1101/2023.07.28.550789 
    ​Details  DOI 
  • 2023 | Preprint
    ​ ​A scalable clustering algorithm to approximate graph cuts​
    Suchan, L.; Li, H.  & Munk, A. ​ (2023). DOI: https://doi.org/10.48550/ARXIV.2308.09613 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Deep, Deep Learning with BART​
    Blumenthal, M.; Luo, G.; Schilling, M.; Holme, H. C. M.& Uecker, M. ​ (2022)
    ​Details  arXiv 
  • 2022 | Preprint
    ​ ​A Unifying Approach to Distributional Limits for Empirical Optimal Transport​
    Hundrieser, S.; Klatt, M.; Staudt, T.& Munk, A. ​ (2022)
    ​Details  arXiv 
  • 2022 | Preprint
    ​ ​Empirical Optimal Transport between Different Measures Adapts to Lower Complexity​
    Hundrieser, S.; Staudt, T.& Munk, A. ​ (2022)
    ​Details  arXiv 
  • 2022 | Preprint
    ​ ​On the Uniqueness of Kantorovich Potentials​
    Staudt, T.; Hundrieser, S.& Munk, A. ​ (2022)
    ​Details  arXiv 
  • 2022 | Preprint
    ​ ​Quantitative Magnetic Resonance Imaging by Nonlinear Inversion of the Bloch Equations​
    Scholand, N.; Wang, X.; Roeloffs, V.; Rosenzweig, S.& Uecker, M. ​ (2022). DOI: https://doi.org/10.48550/ARXIV.2209.08027 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Conserved reduction of m6A marks during aging and neurodegeneration is linked to altered translation of synaptic transcripts​
    Castro-Hernández, R.; Berulava, T.; Metelova, M.; Epple, R.; Centeno, T. P.; Sakib, M S.& Burkhart, S. et al.​ (2022). DOI: https://doi.org/10.1101/2022.06.08.495100 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​A Sequential Two-Step Priming Scheme Reproduces Diversity in Synaptic Strength and Short-Term Plasticity​
    Lin, K.-H.; Taschenberger, H.& Neher, E. ​ (2022). DOI: https://doi.org/10.2139/ssrn.4075232 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II​
    Rengachari, S.; Schilbach, S.; Kaliyappan, T.; Gouge, J.; Zumer, K.; Schwarz, J.& Urlaub, H. et al.​ (2022). DOI: https://doi.org/10.1101/2022.09.21.508861 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Effects of cryo-EM cooling on structural ensembles​
    Bock, L. V.& Grubmüller, H. ​ (2022). DOI: https://doi.org/10.1101/2021.10.08.463658 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​MemBrain: A Deep Learning-aided Pipeline for Automated Detection of Membrane Proteins in Cryo-electron Tomograms​
    Lamm, L.; Righetto, R. D.; Wietrzynski, W.; Pöge, M.; Martinez-Sanchez, A.; Peng, T.& Engel, B. D.​ (2022). DOI: https://doi.org/10.1101/2022.03.01.480844 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​The 3D structure of lipidic fibrils of α-synuclein​
    Frieg, B.; Antonschmidt, L.; Dienemann, C.; Geraets, J. A.; Najbauer, E. E.; Matthes, D.& de Groot, B. L.  et al.​ (2022). DOI: https://doi.org/10.1101/2022.03.02.481946 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Bayesian MRI Reconstruction with Joint Uncertainty Estimation using Diffusion Models​
    Luo, G.; Blumenthal, M.; Heide, M.& Uecker, M. ​ (2022). DOI: https://doi.org/10.48550/ARXIV.2202.01479 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Multi-color live-cell STED nanoscopy of mitochondria with a gentle inner membrane stain​
    Liu, T.; Stephan, T.; Chen, P.; Chen, J.; Riedel, D.; Yang, Z.& Jakobs, S.  et al.​ (2022). DOI: https://doi.org/10.1101/2022.05.09.491019 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Roadmap for Optical Tweezers​
    Volpe, G.; Maragò, O. M.; Rubinzstein-Dunlop, H.; Pesce, G.; Stilgoe, A. B.; Volpe, G.& Tkachenko, G. et al.​ (2022). DOI: https://doi.org/10.48550/ARXIV.2206.13789 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Diversity of Ganglion Cell Responses to Saccade-like Image Shifts in the Primate Retina​
    Nitsche, S.; Khani, M. H.; Karamanlis, D.; Erol, Y. C.; Zapp, S. J.; Mietsch, M.& Protti, D. A. et al.​ (2022). DOI: https://doi.org/10.1101/2022.08.12.503725 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Statistical analysis of random objects via metric measure Laplacians​
    Mordant, G.& Munk, A. ​ (2022). DOI: https://doi.org/10.48550/arXiv.2204.06493 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Optogenetics and electron tomography for structure-function analysis of cochlear ribbon synapses​
    Chakrabarti, R.; Jaime Tobon, L. M.; Slitin, L.; Redondo-Canales, M.; Hoch, G.; Slashcheva, M.& Fritsch, E. et al.​ (2022). DOI: https://doi.org/10.1101/2022.05.10.491334 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Human mtRF1 terminates COX1 translation and its ablation induces mitochondrial ribosome-associated quality control​
    Nadler, F.; Lavdovskaia, E.; Krempler, A.; Cruz-Zaragoza, L. D.; Dennerlein, S.& Richter-Dennerlein, R. ​ (2022). DOI: https://doi.org/10.1101/2022.07.08.499411 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​In silico modeling for personalized stenting in aortic coarctation​
    Ma, D.; Wang, Y.; Azhar, M.; Adler, A.; Steinmetz, M.& Uecker, M. ​ (2022). DOI: https://doi.org/10.48550/ARXIV.2205.04518 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​A mono- and intralink filter (mi-filter) to improve false-discovery rates in cross-linking mass spectrometry data​
    Chen, X.; Sailer, C.; Kammer, K. M.; Fürsch, J.; Eisele, M. R.; Sakata, E.  & Stengel, F.​ (2022). DOI: https://doi.org/10.1101/2022.02.03.478943 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​The AAA+ chaperone VCP disaggregates Tau fibrils and generates aggregate seeds​
    Saha, I.; Yuste-Checa, P.; Silva Padilha, M. D.; Guo, Q.; Körner, R.; Holthusen, H.& Trinkaus, V. A. et al.​ (2022). DOI: https://doi.org/10.1101/2022.02.18.481043 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Graded optogenetic activation of the auditory pathway for hearing restoration​
    Mittring, A.; Moser, T.  & Huet, A. ​ (2022). DOI: https://doi.org/10.1101/2022.09.05.506618 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Functional Neuroligin-2-MDGA1 interactions differentially regulate synaptic GABAARs and cytosolic gephyrin aggregation​
    Zeppillo, T.; Ali, H.; Wenger, S.; Lopez Murcia, F. J.; Gideons, E.; Signorelli, J.& Schmeisser, M. J. et al.​ (2022). DOI: https://doi.org/10.1101/2022.08.08.503083 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Graphene-Induced Energy Transfer for Quantitative Membrane Biophysics at Sub-Nanometer Resolution​
    Chen, T.; Ghosh, A.& Enderlein, J. ​ (2022). DOI: https://doi.org/10.48550/ARXIV.2211.03517 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Homozygous loss-of-function variants in FILIP1 cause autosomal recessive arthrogryposis multiplex congenita​
    Schnabel, F.; Schuler, E.; Al-Maawali, A.; Chaurasia, A.; Syrbe, S.; Al-Kindi, A.& Bhav, G. S. et al.​ (2022). DOI: https://doi.org/10.21203/rs.3.rs-2121654/v1 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Unbalanced Kantorovich-Rubinstein distance and barycenter for finitely supported measures: A statistical perspective​
    Heinemann, F.; Klatt, M.& Munk, A. ​ (2022). DOI: https://doi.org/10.48550/ARXIV.2211.08858 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Piccolino regulates the architecture of the ribbon at cochlear inner hair cell synapses​
    Michanski, S.; Kapoor, R.; Steyer, A. M.; Möbius, W. ; Früholz, I.; Ackermann, F.& Gültas, M. et al.​ (2022). DOI: https://doi.org/10.1101/2022.12.15.520589 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Dystrophin is a mechanical tension modulator​
    Hofemeier, A. D.; Muenker, T. M.; Herkenrath, F.; Ristau, M.; Brandt, M.; Shahriyari, M.& Tiburcy, M. et al.​ (2022). DOI: https://doi.org/10.1101/2022.12.23.521750 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​IDH3γ serves as a redox switch that regulates mitochondrial energy metabolism and contractility in the heart under oxidative stress​
    Nanadikar, M.; Leon, A. V.; Guo, J.; Belle, G. van; Jatho, A.; Brandner, A.& Böckmann, R. et al.​ (2022). DOI: https://doi.org/10.21203/rs.3.rs-1594117/v1 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Phosphorylation Determines Whether Neuroligin-3 is at Excitatory or Inhibitory Synapses in Different Regions of the Brain​
    Altas, B.; Tuffy, L. P.; Patrizi, A.; Dimova, K.; Soykan, T.; Romanowski, A. J.& Robertson, C. D. et al.​ (2022). DOI: https://doi.org/10.1101/2022.07.23.501257 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Cryo-electron tomography reveals enrichment and identifies microtubule lumenal particles in neuronal differentiation​
    Chakraborty, S.; Martinez-Sanchez, A.; Beck, F.; Toro-Nahuelpan, M.; Hwang, I.-Y.; Noh, K.-M.& Baumeister, W. et al.​ (2022). DOI: https://doi.org/10.1101/2022.07.28.501854 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​From LUVs to GUVs - how to cover micrometer-sized pores with membranes​
    Kramer, K.; Sari, M.; Schulze, K.; Flegel, H.; Stehr, M.; Mey, I.& Janshoff, A.  et al.​ (2022). DOI: https://doi.org/10.26434/chemrxiv-2022-1jtms 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Filter-based models of suppression in retinal ganglion cells: comparison and generalization across species and stimuli​
    Shahidi, N.; Rozenblit, F.; Khani, M. H.; Schreyer, H. M.; Mietsch, M.; Protti, D. A.& Gollisch, T. ​ (2022). DOI: https://doi.org/10.1101/2022.12.01.518577 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Impact of native-like lipid membranes on the architecture and contractility of actomyosin networks​
    Liebe, N. L.; Mey, I.; Vuong, L.; Geil, B.; Janshoff, A.  & Steinem, C. ​ (2022). DOI: https://doi.org/10.1101/2022.07.22.501094 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Expansion microscopy at one nanometer resolution​
    Shaib, A. H.; Chouaib, A. A.; Imani, V.; Chowdhury, R.; Georgiev, S. V.; Mougios, N.& Monga, M. et al.​ (2022). DOI: https://doi.org/10.1101/2022.08.03.502284 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Simple Model for Encoding Natural Images by Retinal Ganglion Cells with Nonlinear Spatial Integration​
    Liu, J. K. ; Karamanlis, D.& Gollisch, T. ​ (2022). DOI: https://doi.org/10.1101/2021.08.29.458067 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Alteration of myocardial structure and function in RAF1-associated Noonan syndrome: Insights from cardiac disease modeling based on patient-derived iPSCs​
    Nakhaei-Rad, S.; Bazgir, F.; Dahlmann, J.; Busley, A. V.; Buchholzer, M.; Haghighi, F.& Schänzer, A. et al.​ (2022). DOI: https://doi.org/10.1101/2022.01.22.477319 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​A quantitative fluorescence-based approach to study mitochondrial protein import​
    Jain, N.; Gomkale, R.; Bernhard, O.; Rehling, P.  & Cruz-Zaragoza, L. D.​ (2022). DOI: https://doi.org/10.1101/2022.10.10.511594 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​The SARS-CoV-2 protein ORF3c is a mitochondrial modulator of innate immunity​
    Stewart, H.; Lu, Y.; O’Keefe, S.; Valpadashi, A.; Cruz-Zaragoza, L. D.; Michel, H. A.& Nguyen, S. K. et al.​ (2022). DOI: https://doi.org/10.1101/2022.11.15.516323 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​A Measure of the Complexity of Neural Representations based on Partial Information Decomposition​
    Ehrlich, D. A.; Schneider, A. C.; Priesemann, V.; Wibral, M.& Makkeh, A.​ (2022). DOI: https://doi.org/10.48550/ARXIV.2209.10438 
    ​Details  DOI  arXiv 
  • 2022 | Preprint
    ​ ​Two-color live-cell STED nanoscopy by click labeling with cell-permeable fluorophores​
    Gregor, C.; Grimm, F.; Rehman, J.; Wurm, C. A.& Egner, A.​ (2022). DOI: https://doi.org/10.1101/2022.09.11.507450 
    ​Details  DOI 
  • 2022 | Preprint
    ​ ​Tackling the Dynamic Range Problem of Hearing: Diverse Hair Cell Synapses Enable Broad Neural Sound Intensity Coding​
    Jaime Tobón, L. M.& Moser, T.​ (2022). DOI: https://doi.org/10.2139/ssrn.4203980 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Isotropic Three-Dimensional Dual-Color Super-Resolution Microscopy with Metal-Induced Energy Transfer​
    Thiele, J. C. ; Jungblut, M.; Helmerich, D. A.; Tsukanov, R. ; Chizhik, A. M. ; Chizhik, A. I.  & Schnermann, M. et al.​ (2021). DOI: https://doi.org/10.1101/2021.12.20.473473 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Minimax detection of localized signals in statistical inverse problems​
    Pohlmann, M.; Werner, F.& Munk, A. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Kantorovich-Rubinstein distance and barycenter for finitely supported measures: Foundations and Algorithms​
    Heinemann, F.; Klatt, M.& Munk, A. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Free-Breathing Myocardial T1 Mapping using Inversion-Recovery Radial FLASH and Motion-Resolved Model-Based Reconstruction​
    Wang, X.; Rosenzweig, S.; Roeloffs, V.; Blumenthal, M.; Tan, Z.; Scholand, N.& Holme, H. C. M. et al.​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Optimal transfer functions for bandwidth-limited imaging​
    Stallinga, S.; Delon, A.& Enderlein, J. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Statistical spatial analysis for cryo-electron tomography​
    Martinez-Sanchez, A.; Baumeister, W.& Lučić, V.​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Transport Dependency: Optimal Transport Based Dependency Measures​
    Nies, T. G.; Staudt, T.& Munk, A. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Limit Distributions and Sensitivity Analysis for Entropic Optimal Transport on Countable Spaces​
    Hundrieser, S.; Klatt, M.& Munk, A. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​The Statistics of Circular Optimal Transport​
    Hundrieser, S.; Klatt, M.& Munk, A. ​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Analyzing cross-talk between superimposed signals: Vector norm dependent hidden Markov models and applications​
    Vanegas, L. J.; Eltzner, B.; Rudolf, D. ; Dura, M.; Lehnart, S. E.  & Munk, A. ​ (2021). DOI: https://doi.org/10.48550/arXiv.2103.06071 
    ​Details  DOI  arXiv 
  • 2021 | Preprint
    ​ ​The ultrametric Gromov-Wasserstein distance​
    Mémoli, F.; Munk, A. ; Wan, Z.& Weitkamp, C.​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Free-Breathing Water, Fat, ^{\star}$ and $ Field Mapping of the Liver Using Multi-Echo Radial FLASH and Regularized Model-based Reconstruction (MERLOT)​
    Tan, Z.; Rosenzweig, S.; Wang, X.; Scholand, N.; Holme, C. ; Blumenthal, M.& Voit, D. et al.​ (2021)
    ​Details  arXiv 
  • 2021 | Preprint
    ​ ​Single-cell transcription profiles in Bloom syndrome patients link BLM deficiency with altered condensin complex expression signatures​
    Gönenc, I. I.; Wolff, A.; Schmidt, J.; Zibat, A.; Müller, C.; Cyganek, L.  & Argyriou, L. et al.​ (2021). DOI: https://doi.org/10.1101/2021.10.01.462717 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis​
    Kabinger, F.; Stiller, C.; Schmitzová, J.; Dienemann, C.; Hillen, H. S. ; Höbartner, C.& Cramer, P. ​ (2021). DOI: https://doi.org/10.1101/2021.05.11.443555 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Sequence determinants of human gene regulatory elements​
    Sahu, B.; Hartonen, T.; Pihlajamaa, P.; Wei, B.; Dave, K.; Zhu, F.& Kaasinen, E. et al.​ (2021). DOI: https://doi.org/10.1101/2021.03.18.435942 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Mapping Activity-Dependent Quasi-Stationary States of Mitochondrial Membranes with Graphene-Induced Energy Transfer Imaging​
    Raja, S. O.; Chizhik, A. I.; Schmidt, C. F.; Enderlein, J.  & Ghosh, A.​ (2021). DOI: https://doi.org/10.1101/2021.06.15.448547 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Alpha-synuclein induces epigenomic dysregulation of glutamate signaling and locomotor pathways​
    Schaffner, S. L.; Wassouf, Z.; Lazaro, D. F.; Xylaki, M.; Gladish, N.; Lin, D. T. S.& MacIsaac, J. et al.​ (2021). DOI: https://doi.org/10.1101/2021.06.12.448150 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Cofilin pathology is a new player on α-synuclein-induced spine impairment in models of hippocampal synucleinopathy​
    Oliveira da Silva, M. I.; Santejo, M.; Babcock, I. W.; Magalhães, A.; Minamide, L. S.; Castillo, E.& Gerhardt, E. et al.​ (2021). DOI: https://doi.org/10.1101/2021.02.02.425931 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Endogenous Levels of Alpha-synuclein Modulate Seeding and Aggregation in Cultured Cells​
    Vasili, E.; Dominguez-Meijide, A.; Flores-Léon, M.; Al-Azzani, M.; Kanellidi, A.; Melki, R.& Stefanis, L. et al.​ (2021). DOI: https://doi.org/10.21203/rs.3.rs-1152192/v1 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Oct4 primarily controls enhancer activity rather than accessibility​
    Xiong, L.; Tolen, E. A.; Choi, J.; Caizzi, L.; Adachi, K.; Lidschreiber, M.& Cramer, P.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.06.28.450119 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Gel-like inclusions of C-terminal fragments of TDP-43 sequester and inhibit proteasomes in neurons​
    Riemenschneider, H.; Guo, Q.; Bader, J.; Frottin, F.; Farny, D.; Kleinberger, G.& Haass, C. et al.​ (2021). DOI: https://doi.org/10.1101/2021.03.15.435268 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​A DNA-based optical force sensor for live-cell applications​
    Jayachandran, C.; Ghosh, A.; Prabhune, M.; Bath, J.; Turberfield, A. J.; Hauke, L.& Enderlein, J. et al.​ (2021). DOI: https://doi.org/10.1101/2021.12.21.473677 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Amyloid-like aggregates cause lysosomal defects in neurons via gain-of-function toxicity​
    Riera-Tur, I.; Schäfer, T.; Hornburg, D.; Mishra, A.; Fernández-Mosquera, L.; Feigenbutz, D.& Auer, P. et al.​ (2021). DOI: https://doi.org/10.1101/2019.12.16.877431 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Folding of VemP into translation-arresting secondary structure is driven by the ribosome exit tunnel​
    Kolář, M. H.; Nagy, G.; Kunkel, J.; Vaiana, S. M.; Bock, L. V.& Grubmüller, H. ​ (2021). DOI: https://doi.org/10.1101/2021.04.15.440051 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Super-resolution microscopy informs on the molecular architecture of alpha-synuclein inclusions in model systems and in the human brain​
    Weish, P.; Lázaro, D. F.; Palmares, L.; Santos, P. I.; Stadelmann, C. ; Höglinger, G. U.& Rizzoli, S. O.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.04.25.441304 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Dimeric form of SARS-CoV-2 polymerase​
    Jochheim, F. A.; Tegunov, D.; Hillen, H. S. ; Schmitzova, J.; Kokic, G.; Dienemann, C.& Cramer, P. ​ (2021). DOI: https://doi.org/10.1101/2021.03.23.436644 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​A novel single-cell RNA-sequencing platform and its applicability connecting genotype to phenotype in ageing-disease​
    Shomroni, O.; Sitte, M.; Schmidt, J.; Parbin, S.; Ludewig, F.; Yigit, G.& Zelarayan, L. C.  et al.​ (2021). DOI: https://doi.org/10.21203/rs.3.rs-957427/v1 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Cryo-electron tomography of native Drosophila tissues vitrified by plunge freezing​
    Bäuerlein, F. J. B.; Pastor-Pareja, J. C.& Fernández Busnadiego, R. ​ (2021). DOI: https://doi.org/10.1101/2021.04.14.437159 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Instant three color multi-plane fluorescence microscopy​
    Gregor, I.; Butkevich, E.; Enderlein, J.  & Mojiri, S.​ (2021). DOI: https://doi.org/10.1101/2021.05.07.443091 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​PolyQ expansion does not alter the Huntingtin-HAP40 complex​
    Huang, B.; Guo, Q.; Niedermeier, M. L.; Cheng, J.; Engler, T.; Maurer, M.& Pautsch, A. et al.​ (2021). DOI: https://doi.org/10.1101/2021.02.02.429316 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Exfoliation and Optical Properties of Near-Infrared Fluorescent Silicate Nanosheets​
    Selvaggio, G.; Weitzel, M.; Oleksiievets, N.; Oswald, T. A. ; Nißler, R.; Mey, I.  & Karius, V.  et al.​ (2021). DOI: https://doi.org/10.26434/chemrxiv.13350728.v1 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Fast photoswitchable molecular prosthetics control neuronal activity in the cochlea​
    Garrido-Charles, A.; Huet, A.; Matera, C.; Thirumalai, A.; Llebaria, A.; Moser, T.  & Gorostiza, P.​ (2021). DOI: https://doi.org/10.1101/2021.05.25.445123 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​A fluorescent nanosensor paint reveals the heterogeneity of dopamine release from neurons at individual release sites​
    Elizarova, S.; Chouaib, A.; Shaib, A.; Mann, F.; Brose, N. ; Kruss, S.& Daniel, J. A.​ (2021). DOI: https://doi.org/10.1101/2021.03.28.437019 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Monitoring Alpha-Synuclein – Tau Interactions In Vitro and In Vivo Using Bimolecular Fluorescence Complementation​
    Torres-Garcia, L.; Domingues, J. M.; Brandi, E.; Haikal, C.; Brás, I. C.; Gerhardt, E.& Li, W. et al.​ (2021). DOI: https://doi.org/10.21203/rs.3.rs-960446/v1 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Ectosomes and exosomes are distinct proteomic entities that modulate spontaneous activity in neuronal cells​
    Brás, I. C.; Khani, M. H.; Riedel, D.; Parfentev, I.; Gerhardt, E.; van Riesen, C.& Urlaub, H. et al.​ (2021). DOI: https://doi.org/10.1101/2021.06.24.449731 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Allosteric control of Ubp6 and the proteasome via a bidirectional switch​
    Hung, K. Y. S.; Klumpe, S.; Eisele, M. R.; Elsasser, S.; Tian, G.; Sun, S.& Moroco, J. A. et al.​ (2021). DOI: https://doi.org/10.1101/2021.07.16.452743 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Human engineered skeletal muscle of hypaxial origin from pluripotent stem cells with advanced function and regenerative capacity​
    Shahriyari, M.; Islam, M. R.; Sakib, M. S.; Rika, A.; Krüger, D.; Kaurani, L.& Anandakumar, H. et al.​ (2021). DOI: https://doi.org/10.1101/2021.07.12.452030 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​A mathematical model for electrical activity in pig atrial tissue​
    Peris-Yagüe, V.; Rubio, T.; Fakuade, F. E.; Voigt, N. ; Luther, S.  & Majumder, R.​ (2021). DOI: https://doi.org/10.1101/2021.10.18.464761 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Resolving the molecular architecture of the photoreceptor active zone by MINFLUX nanoscopy​
    Grabner, C. P.; Jansen, I.; Neef, J.; Weiss, T.; Schmidt, R.; Riedel, D.& Wurm, C. A. et al.​ (2021). DOI: https://doi.org/10.1101/2021.05.28.446138 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Common molecular mechanisms underlie the transfer of alpha-synuclein, Tau and huntingtin and modulate spontaneous activity in neuronal cells​
    Brás, I. C.; Khani, M. H.; Vasili, E.; Möbius, W. ; Riedel, D.; Parfentev, I.& Gerhardt, E. et al.​ (2021). DOI: https://doi.org/10.1101/2021.07.18.452825 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Electrically Controlling and Optically Observing the Membrane Potential of Supported Lipid Bilayers​
    Yudovich, S.; Marzouqe, A.; Kantorovitsch, J.; Teblum, E.; Chen, T.; Enderlein, J.  & Miller, E. W. et al.​ (2021). DOI: https://doi.org/10.1101/2021.12.10.472087 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Nuclear alpha-synuclein is present in the human brain and is modified in dementia with Lewy bodies​
    Koss, D. J.; Erskine, D.; Porter, A.; Palmoski, P.; Leite, M.; Attems, J.& Outeiro, T. F. ​ (2021). DOI: https://doi.org/10.1101/2021.10.20.465125 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​RIM-Binding Protein 2 organizes Ca2+ channel topography and regulates release probability and vesicle replenishment at a fast central synapse​
    Butola, T.; Alvanos, T.; Hintze, A.; Koppensteiner, P.; Kleindienst, D.; Shigemoto, R.& Wichmann, C.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.03.20.435607 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Hearing restoration by a low-weight power-efficient multichannel optogenetic cochlear implant system​
    Jablonski, L.; Harczos, T.; Wolf, B.; Hoch, G.; Dieter, A.; Hessler, R.& Ayub, S. et al.​ (2021). DOI: https://doi.org/10.1101/2020.05.25.114868 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​IGF1 Receptor Regulates Upward Firing Rate Homeostasis via the Mitochondrial Calcium Uniporter​
    Katsenelson, M.; Shapira, I.; Abbas, E.; Styr, B.; Aïd, S.; Holzenberger, M.& Rizzoli, S.  et al.​ (2021). DOI: https://doi.org/10.1101/2021.12.11.469196 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Generation of bright autobioluminescent bacteria by chromosomal integration of the improved lux operon ilux2​
    Gregor, C. ​ (2021). DOI: https://doi.org/10.1101/2021.12.10.472100 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Integrative multi-omics analyses reveal multi-modal FOXG1 functions acting on epigenetic processes and in concert with NEUROD1 to regulate synaptogenesis in the mouse hippocampus​
    Akol, I.; Heidrich, S.; ÓhAilín, D.; Hacker, C.; Villarreal, A.; Rauleac, T.& Bella, C. et al.​ (2021). DOI: https://doi.org/10.1101/2021.10.25.465562 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Environmental enrichment enhances patterning and remodeling of synaptic nanoarchitecture revealed by STED nanoscopy​
    Wegner, W.; Steffens, H.; Gregor, C.; Wolf, F.  & Willig, K. I. ​ (2021). DOI: https://doi.org/10.1101/2020.10.23.352195 
    ​Details  DOI 
  • 2021 | Preprint
    ​ ​Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling​
    Hillen, H. S. ; Lavdovskaia, E.; Nadler, F.; Hanitsch, E.; Linden, A.; Bohnsack, K. E.& Urlaub, H. et al.​ (2021). DOI: https://doi.org/10.1101/2021.03.17.435767 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Randomised Wasserstein Barycenter Computation: Resampling with Statistical Guarantees​
    Heinemann, F.; Munk, A.  & Zemel, Y.​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​The Coding And Small-Non-Coding Hippocampal Synaptic RNAome​
    Epple, R.; Krüger, D.; Berulava, T.; Brehm, G.; Islam, R.; Köster, S.  & Fischer, A. ​ (2020). DOI: https://doi.org/10.1101/2020.11.27.401901 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Variational Multiscale Nonparametric Regression: Algorithms and Implementation​
    del Alamo, M.; Li, H. ; Munk, A.  & Werner, F.​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Optimistic search strategy: Change point detection for large-scale data via adaptive logarithmic queries​
    Kovács, S.; Li, H. ; Haubner, L.; Munk, A.  & Bühlmann, P.​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Physics-based Reconstruction Methods for Magnetic Resonance Imaging​
    Wang, X.; Tan, Z.; Scholand, N.; Roeloffs, V.& Uecker, M. ​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​CG-SENSE revisited: Results from the first ISMRM reproducibility challenge​
    Maier, O.; Baete, S. H.; Fyrdahl, A.; Hammernik, K.; Harrevelt, S.; Kasper, L.& Karakuzu, A. et al.​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Heterogeneous Idealization of Ion Channel Recordings -- Open Channel Noise​
    Pein, F.; Bartsch, A.; Steinem, C.  & Munk, A. ​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Gromov-Wasserstein Distance based Object Matching: Asymptotic Inference​
    Weitkamp, C. A.; Proksch, K.; Tameling, C.& Munk, A. ​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​What is resolution? A statistical minimax testing perspective on super-resolution microscopy​
    Kulaitis, G.; Munk, A.  & Werner, F.​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Seeded Binary Segmentation: A general methodology for fast and optimal change point detection​
    Kovács, S.; Li, H. ; Bühlmann, P.& Munk, A. ​ (2020)
    ​Details  arXiv 
  • 2020 | Preprint
    ​ ​Testing for dependence on tree structures​
    Behr, M.; Ansari, M. A.; Munk, A.  & Holmes, C.​ (2020). DOI: https://doi.org/10.1101/622811 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Structural basis of nucleosome transcription mediated by Chd1 and FACT​
    Farnung, L.; Ochmann, M.; Engeholm, M.& Cramer, P. ​ (2020). DOI: https://doi.org/10.1101/2020.11.30.403857 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Stable but not rigid: Long-term in vivo STED nanoscopy uncovers extensive remodeling of stable spines and indicates multiple drivers of structural plasticity​
    Steffens, H.; Mott, A. C.; Li, S.; Wegner, W.; Švehla, P.; Kan, V. W. Y.& Wolf, F.  et al.​ (2020). DOI: https://doi.org/10.1101/2020.09.21.306902 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Three-dimensional beating dynamics of Chlamydomonas flagella​
    Mojiri, S.; Isbaner, S.; Mühle, S.; Jang, H.; Bae, A. J.; Gregor, I.& Gholami, A. et al.​ (2020). DOI: https://doi.org/10.1101/2020.07.20.212159 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​SETD1B controls cognitive function via cell type specific regulation of neuronal identity genes​
    Michurina, A.; Sakib, S.; Kerimoglu, C.; Krüger, D. M.; Kaurani, L.; Islam, R.& Centeno, T. P. et al.​ (2020). DOI: https://doi.org/10.1101/2020.08.07.240853 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Molecular and functional architecture of striatal dopamine release sites​
    Banerjee, A.; Imig, C.; Balakrishnan, K.; Kershberg, L.; Lipstein, N.; Uronen, R.-L.& Wang, J. et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.25.398255 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Doxycycline inhibits α-synuclein-associated pathologies in vitro and in vivo​
    Dominguez-Meijide, A.; Parrales, V.; Vasili, E.; González-Lizárraga, F.; König, A.; Lázaro, D. F.& Lannuzel, A. et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.06.371229 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.7 Å inside cells​
    Tegunov, D.; Xue, L.; Dienemann, C.; Cramer, P.  & Mahamid, J.​ (2020). DOI: https://doi.org/10.1101/2020.06.05.136341 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Doxycycline interferes with tau amyloid aggregation abolishing its associated neuronal toxicity​
    Medina, L.; González-Lizárraga, F.; Dominguez-Meijide, A.; Ploper, D.; Parrales, V.; Sequeira, S.& Cima-Omori, M. S. et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.18.388561 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Choice of fluorophore affects dynamic DNA nanostructures​
    Jahnke, K.; Grubmüller, H. ; Igaev, M.& Göpfrich, K.​ (2020). DOI: https://doi.org/10.1101/2020.12.12.422444 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​White matter integrity requires continuous myelin synthesis at the inner tongue​
    Meschkat, M.; Steyer, A. M.; Weil, M.-T.; Kusch, K.; Jahn, O.; Piepkorn, L.& Agüi-Gonzalez, P. et al.​ (2020). DOI: https://doi.org/10.1101/2020.09.02.279612 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Local translation in synaptic mitochondria influences synaptic transmission​
    Yousefi, R.; Fornasiero, E. F.; Cyganek, L.; Jakobs, S. ; Rizzoli, S. O. ; Rehling, P.  & Pacheu-Grau, D.​ (2020). DOI: https://doi.org/10.1101/2020.07.22.215194 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​In situ architecture of neuronal α-Synuclein inclusions​
    Trinkaus, V. A.; Riera-Tur, I.; Martínez-Sánchez, A.; Bäuerlein, F. J. B.; Guo, Q.; Arzberger, T.& Baumeister, W. et al.​ (2020). DOI: https://doi.org/10.1101/2020.08.07.234138 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Multiple Haplotype Reconstruction from Allele Frequency Data​
    Pelizzola, M.; Behr, M.; Li, H. ; Munk, A.  & Futschik, A.​ (2020). DOI: https://doi.org/10.1101/2020.07.09.191924 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Parental genome unification is highly erroneous in mammalian embryos​
    Cavazza, T.; Politi, A. Z.; Aldag, P.; Baker, C.; Elder, K.; Blayney, M.& Lucas-Hahn, A. et al.​ (2020). DOI: https://doi.org/10.1101/2020.08.27.269779 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding​
    Bartsch, A.; Ives, C. M.; Kattner, C.; Pein, F.; Diehn, M.; Tanabe, M.& Munk, A.  et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.06.369579 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​The Role of Alpha-Synuclein And Other Parkinson’s Genes in Neurodevelopmental and Neurodegenerative Disorders​
    Morato Torres, C. A.; Wassouf, Z.; Zafar, F.; Sastre, D.; Outeiro, T. F.  & Schüle, B.​ (2020). DOI: https://doi.org/10.20944/preprints202007.0334.v1 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Macromolecular and electrical coupling between inner hair cells in the rodent cochlea​
    Jean, P.; Anttonen, T.; Michanski, S.; de Diego, A. M. G.; Steyer, A. M.; Neef, A.& Oestreicher, D. et al.​ (2020). DOI: https://doi.org/10.1101/2019.12.17.879767 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​A Transcriptome Analysis Identifies Potential Preventive and Therapeutic Approaches Towards COVID-19​
    Islam, M. R.& Fischer, A. ​ (2020). DOI: https://doi.org/10.20944/preprints202004.0399.v1 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Epigenetic gene-expression links heart failure to memory impairment​
    Islam, R.; Lbik, D.; Sakib, S.; Hofmann, R. M.; Berulava, T.; Mausbach, M. J.& Cha, J. et al.​ (2020). DOI: https://doi.org/10.1101/2020.01.22.915637 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R​
    Dankovich, T. M.; Kaushik, R.; Petersen, G. C.; Giro, P. E.; Hadi, H. A.; Bao, G.& Beuermann, S. et al.​ (2020). DOI: https://doi.org/10.1101/2020.11.11.377515 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​The mammalian rod synaptic ribbon is essential for Cav channel facilitation and ultrafast fusion of the readily releasable pool of vesicles​
    Grabner, C. P.  & Moser, T. ​ (2020). DOI: https://doi.org/10.1101/2020.10.12.336503 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Electron Microscopic Reconstruction of Neural Circuitry in the Cochlea​
    Hua, Y.; Ding, X.; Wang, H.; Wang, F.; Gao, Y.; Lu, Y.& Moser, T.  et al.​ (2020). DOI: https://doi.org/10.1101/2020.01.04.894816 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Ruler elements in chromatin remodelers set nucleosome array spacing and phasing​
    Oberbeckmann, E.; Niebauer, V.; Watanabe, S.; Farnung, L.; Moldt, M.; Schmid, A.& Cramer, P.  et al.​ (2020). DOI: https://doi.org/10.1101/2020.02.28.969618 
    ​Details  DOI 
  • 2020 | Preprint
    ​ ​Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology​
    Kargapolova, Y.; Rehimi, R.; Kayserili, H.; Brühl, J.; Zirkel, A.; Li, Y.& Yigit, G. et al.​ (2020). DOI: https://doi.org/10.1101/2020.01.27.921171 
    ​Details  DOI 
  • 2020 | Preprint | 
    ​ ​Analysis of Patchclamp Recordings: Model-Free Multiscale Methods and Software​
    Pein, F.; Eltzner, B.& Munk, A. ​ (2020)
    ​Details 

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